Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01647 ATGCTAAATTTCCCTCAGACCCCCAGATCTCTTCCGCGAGTTATGACTGATCCAGTAATCATGTCTAGTGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCATCAGAATACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCAAAAAGGGATAAAGTATCTGGCAAATGGTGCTTCAGTTACGACGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCACCTGAGGCTGATGTTGTTTATGTGGGATCTCTCAAGGCTGATGTTGATGCAAATGAGCAAGAGAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAATTGCGTGCCTACTTTTATTCCTTCAGACCTCTACAAACAATTCCATGATGGTTTCTGCAAGCAACAATTGTGGCCCCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGGTCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCAACATTTCTGCGAAAGCGGTGTAGTCGAGTCAGGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCGGAAGTTTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCATTGCTTAATGCAGATTTAGTTGGTTTCCACACCTTTGATTACGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTTGGCTTGGAACATGAATCTAAGAGGGGTTACATAGGGCTTGAATACTTTGGCCGTACAATATTCATTAAAATATTGCCTCCGGGGATTCACATGGGTCGACTTCAATCTACCTTAGATCACCCTTCCTCTTCCAACAAAGTCAGAGAAATCCACCAACAATTTAAGGGGAAAAAGCTTATAGTTGGTGTTGATGATATGGACTTATTCAAAGGTATCGGTTTAAAATTCTTGGCCATGGAGCAACTCCTGCAGCAATATCCAGAACAGCAAGGTGAATTAATATTGATCCAAATTTTAAATCCCCCAAGTAGTTCTGACAAAGATGTTGAGGATGCAAAGGAGGAGGCCTACATTTCAGCCAAAAGGATAAATGAAAGGTTTGGTTTGGAAGGTTATGAACCTATCATCATCATTGATCGCCATGTTCCTTTCTACGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTGCGTGATGGTTTGAATTTGGTTCCTTACAAGTACACTGTGTGTAGGCAGGGAAGTTCTAAACTGGACGAAGCTTTAGAAATCGCTTCTGACTCCCCACGTGTAAGCGCACTTGTCGTTTCTGAGTTTATAGGTTGCTCACCATCTCTTAGTGGGGCAATAAGGGTAAACCCATGGGATATTGATGCAGTAGCTGAAGCACTAAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAAAAGCACTATCGGTATGTTAGTTCTCATGATGTGGCATACTGGGCTCGAAGCTTCGAGCAAGATCTAGTGTTCTCGTGCAAGGATCATTATAATAACCGATGCTGGGGCTTTGGCTTTGGCCTGAACTTCAGAATTTTGTCCCTATCTCCTAGTTTCAGGAGGCTATCCATAGACCACATTGTCCCTGCATATGAAAGGAGCAGTTGCAGGGCAATCTTTTTGGATTATGATGGTACGGTTGTGCCTCAGGCTTCCATTGTTAAACCCCCCAGTCCTGAAGTCATATCTGTGCTAAATAATATATGCAGTGATGTTAGAAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAACCTCACTGAGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTCATAAGGTGGGGTAAACATACTAGTTGGCAAATGAGTCATGCAGATACAGATTTTGCATGGAAAAAGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCTACAGACGGCTCCTCTGTAGAGACCAAAGAGAGTGCCTTGGTATGGCATTACCGTGACGCCGATCCTGATTTCGGATCTTGGCAAGCCATGGAGCTGCTGGATCACCTTGAAAATGTACTTGCAAATGAGCCTGTAGTTGTCAAAAAGGGACAACACATTATTGAAGTCAAGCCTCAGGGCATTACTAAAGGGTCAGTTGCACAGGAAGTTCTTTCTTCCCTAACCAAGAAGGGTAAATCGCCAGATTTTGTACTGTGCATTGGTGATGATAGATCTGATGAGGACATGTTTGAGAGCATATTAGCCAAACCTTATAGTACTACCTCATCCTCAGCACCACAAATCTTTGCATGCACTGTTGGACAAAAACCGAGCAAAGCTAGGTACTACCTAGATGACACTGTCGATGTGATGGCATTACTTGAGGGTCTTGGTGCTACTTCAGGGCCTAAATCAAGATATTCTACAGAAACCCCTTTTGAGAAAAGAGAAGTATGTTTTGAGAATGATGTTTGA 2550 0.4247 MLNFPQTPRSLPRVMTDPVIMSSGDGKQSNDDDSGVFSSEYRRKIIIVSNSLPLNAKRDKVSGKWCFSYDEDSIFWQLKDGLSPEADVVYVGSLKADVDANEQEKVSLQLLEEFNCVPTFIPSDLYKQFHDGFCKQQLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVRLGFFLHSPFPSSEVYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYFGRTIFIKILPPGIHMGRLQSTLDHPSSSNKVREIHQQFKGKKLIVGVDDMDLFKGIGLKFLAMEQLLQQYPEQQGELILIQILNPPSSSDKDVEDAKEEAYISAKRINERFGLEGYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSSKLDEALEIASDSPRVSALVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHYNNRCWGFGFGLNFRILSLSPSFRRLSIDHIVPAYERSSCRAIFLDYDGTVVPQASIVKPPSPEVISVLNNICSDVRNTVFIVSGRGKTSLSEWFDQCENLGIAAEHGYFIRWGKHTSWQMSHADTDFAWKKIAEPVMRSYMEATDGSSVETKESALVWHYRDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGSVAQEVLSSLTKKGKSPDFVLCIGDDRSDEDMFESILAKPYSTTSSSAPQIFACTVGQKPSKARYYLDDTVDVMALLEGLGATSGPKSRYSTETPFEKREVCFENDV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01647 849 Gene3D Glycogen Phosphorylase B; 36 295 - -
Gma06g01647 849 CDD GT20_TPS 44 527 IPR001830 GO:0003824|GO:0005992
Gma06g01647 849 TIGRFAM T6PP: trehalose-phosphatase 575 820 IPR003337 GO:0003824|GO:0005992
Gma06g01647 849 Pfam Trehalose-phosphatase 578 811 IPR003337 GO:0003824|GO:0005992
Gma06g01647 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 834 IPR001830 GO:0003824|GO:0005992
Gma06g01647 849 Pfam Glycosyltransferase family 20 44 527 IPR001830 GO:0003824|GO:0005992
Gma06g01647 849 CDD HAD_TPP 576 817 - -
Gma06g01647 849 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 576 776 IPR006379 -
Gma06g01647 849 MobiDBLite consensus disorder prediction 1 36 - -
Gma06g01647 849 Gene3D - 577 809 IPR023214 -
Gma06g01647 849 Gene3D Glycogen Phosphorylase B; 296 512 - -
Gma06g01647 849 Gene3D - 658 737 - -
Gma06g01647 849 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 834 - -
Gma06g01647 849 SUPERFAMILY HAD-like 575 823 IPR036412 -
Gma06g01647 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 44 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01647 Gma-Chr6 16324548 16331766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01647 1 847 Trehalose Biosynthesis Gene Families AT1G23870 65.018 0.0 1197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01647 K16055 - gmx:100812031 1735.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01647 06 16324548 16331766 Gma04g01756 04 47032141 47035194 ECH
Gma06g01647 06 16324548 16331766 Gma06g01647 06 16324548 16331766 ECH
Gma04g01756 04 47032141 47035194 Gma06g01647 06 16324548 16331766 GST
Gma05g00343 05 3188884 3191809 Gma06g01647 06 16324548 16331766 PCT
Gma06g01647 06 16324548 16331766 Gma05g00343 05 3188884 3191809 PCT