Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01642 ATGCATATTTTGTCACTGGCTGGTCTTCCACCAGGGGTTCCAAATGTTGTGTCTGGTTTTGGTCCAACTGCAGGTTCAGCTCTTGCCAGTCATATGGATGTGGACAAGAGCAATCTTAAGCCTGTGACATTGGAACTAGGAGGAAAATCACCATTCATAGTGTGTGAGGATGCTGATGTTGACAAGGCAGTCGAACTTGCACACTTTGCTCTGTTCTTCAATCAGGGTCAATGCTGTTGTGCCGGGTCACGTACTTACGTGCATGAACGGATATACGATGAGATTTTTGAGAAAGCGAAGGCAACTGCTTTGAGACGTGTTGTCGGTGATACATTTAAGAAGGGCTTGGACCAAGGTCCCCAGATTGATTCAGAACAGTTTGAGAAAATCCTCCGATGCATTAGATCAGGTATCGAATCCAATGCTAATCTGGAATGTGGTGGTGAAAGAATTGGCACGAAAGGCTTCTTAATTTTTCCAACCAATTAA 489 0.4438 MHILSLAGLPPGVPNVVSGFGPTAGSALASHMDVDKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTYVHERIYDEIFEKAKATALRRVVGDTFKKGLDQGPQIDSEQFEKILRCIRSGIESNANLECGGERIGTKGFLIFPTN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01642 162 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 50 161 IPR016163 GO:0016620
Gma06g01642 162 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 44 51 IPR029510 GO:0016491
Gma06g01642 162 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 36 IPR016162 GO:0016491
Gma06g01642 162 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 72 83 IPR016160 GO:0016491
Gma06g01642 162 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 161 - -
Gma06g01642 162 PANTHER BNAA06G20750D PROTEIN 6 161 - -
Gma06g01642 162 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 49 IPR016162 GO:0016491
Gma06g01642 162 SUPERFAMILY ALDH-like 3 161 IPR016161 GO:0016491
Gma06g01642 162 Pfam Aldehyde dehydrogenase family 37 161 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01642 Gma-Chr6 16252149 16254954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01642 7 161 Aldehyde Dehydrogenase Gene Family AT3G48000 70.690 1.98e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01642 K00128 - tcc:18603880 268.855