Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01637 ATGAAGAAGAGAGTAGCAAGCACCAGCAATGAGTCCTCTAAACTTGATCGCAAAACCATTGAAAGGAACCGCAGAACTCACATGAAATCCCTCTGCCATCAGCTTTCTTCTCTTATTCCTCCCAATCTCAAACCAGTCAAACCCAAGTTGATGCTAGGGCTGCAGGACCAGCTGGATCTTGCAGCAAGGTATATAAGACAAATGACAGAGAGAGTAGAGAAACTGAAGAGGCAGAAGGAGCAAGCCATGTCAAACCAAAGCAATGATGGTAGAAAAATGTTCAACAATAATGTTGAGTCCAAATTGCCAATACTTGAGCTAAGGGACTTGGGTTCCGGCATCGAAGTGATATTGGTGACTGGGTTGAACAAGACATTCATGTTGTACGAAGTTATTAGTGTGCTCGAGGAAGAAGGTGCTGAAGTTGTCACTGCAAGCTTCTCAACTGTTGGGGACAAGATATTTTACGTTGTTCATGCTCAGGCTAAAATATCAAGAGTGGGAGTAGAGACCACGAGGGTGTATAATAGACTTCAAGAGTTTATTGTCCCACCAGAAATCTGGCCGGAAGATGTGTGA 579 0.437 MKKRVASTSNESSKLDRKTIERNRRTHMKSLCHQLSSLIPPNLKPVKPKLMLGLQDQLDLAARYIRQMTERVEKLKRQKEQAMSNQSNDGRKMFNNNVESKLPILELRDLGSGIEVILVTGLNKTFMLYEVISVLEEEGAEVVTASFSTVGDKIFYVVHAQAKISRVGVETTRVYNRLQEFIVPPEIWPEDV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01637 192 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 182 IPR015660 GO:0003700|GO:0006357
Gma06g01637 192 MobiDBLite consensus disorder prediction 1 20 - -
Gma06g01637 192 Coils Coil 58 85 - -
Gma06g01637 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 85 IPR036638 GO:0046983
Gma06g01637 192 PANTHER TRANSCRIPTION FACTOR BHLH162 9 182 - -
Gma06g01637 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 68 IPR011598 GO:0046983
Gma06g01637 192 Gene3D - 12 99 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01637 Gma-Chr6 16185385 16187126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01637 7 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 34.409 2.41e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma06g01637 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01637 - - gmx:100809363 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01637 06 16185385 16187126 Gma06g01637 06 16185385 16187126 ECH
Gma17g00849 17 7204027 7205292 Gma06g01637 06 16185385 16187126 PCT
Gma05g00349 05 3255210 3256084 Gma06g01637 06 16185385 16187126 PCT
Gma06g01637 06 16185385 16187126 Gma17g00849 17 7204027 7205292 PCT
Gma06g01637 06 16185385 16187126 Gma05g00349 05 3255210 3256084 PCT