Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01620 ATGGAAGAAACATTTGTTCCCTTACGTGGGATCAAGAATGATCTCAAAGCAAGAATTCCATGCTACAGACAAGATTGGACCAGTGGATTCCAAGCTGGAATTAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAACACTGATGGAAGTCTCACTGCTGTGCAGACTCTTGCATCAACAGCACTCTGCGGTGTTATTCACTCAATCATTGGAGGACAACCTCTCCTCATACTGGGTGTAGCTGAGCCAACAGTCTTGATGTATACATTCATGTATAACTTTGCTAAGGATCGCAAGGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTGTTGCTGTTCTTGCTGGCCGTTCTTGGTGCATGTTCCATAATCAATAGATTCACACGCATCGCTGGTGAATTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGTCTTGTGGAAGAGTTTGGTGCACCCAAGAACCAGAGAGAAGGTACCAATCAGGTTGCACTTCAGTCATCTTGGCTGTTTGGTAATGGAATGTTTGCTTTAGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTACAAAGTCGCAAGGCTAGATCCTGGCGTTATGGCTCAGGTTGGCTACGAGGATTTATAGCTGATTACGGAGTCCCACTAATGGTCCTCGTATGGACTGCGGTGTCTTACATACCAGTCAATGAGGTTCCAAAGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCGAATTGGACTGTTGTTAAGGAAATGTTGAATGTGCCCCCCTTATATATTGTTGGAGCATTTATACCAGCAACTATGATTGCAGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGCTGCTCTTAGGATTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCCAATGGTGTAATTCCACAATCTCCAATGCATACGAAGAGCTTGGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTCGTATCTACTGCACGAAAAAGCATGCGGAGAAATGTTAATTTGAGCCAGTTATACCAAAGTATGAAAGAAGCATATGATGAAATACAGACTCCATTGGTTCCCCAAATGCCACTTACCTTGGGGCTGAAAGAACTGAAGGAATCTACTATTGAACTGGCCTCGAGTCAAGGATATCTTGATGCCCCTGTTGATGAGCTTGTCTTTGATGTGAATAAGGATGTTGATGACCTGTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATTGATGGTCGCAGCCTGTGTTGCTGCTATGCCTGTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGCTTGCCAGGAAATCAATTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAGCTGTTGGAGGAATACCATGCCACCTTTGTTGAGACCGTGCCCTTCAAAACAATTGCCATGTTTACTGTGTTCCAGACACTATACCTGCTTCTCTGCTTCGGCATAACCTGGATACCAATTGCCGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTCCCAGTACGGCAATATTTTCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAAGAGCTGGACGCAGCGGCATATGAGGAAGCACCTGCTATTGCTTTCAACATGTCCTTTGAAGGTCCAAGTAACCAGGCACCAACAGTCAATATCAGCGGTGGGGAAATTCTTGATGAAGTTATTACAAGGAGTCGTGGAGAGTTTCGCCACACTCAAAGCCCCAAAACAACAAGTTCAACTCCAACTTCAATGGGAGATATAAGACCAGCTAATAGCCCTCAATTAACAAGGAGGATTTCTAGCCCTCCAGTAACTGAATTGAGAGGGGAAAGCAGCCTCAGACCAACCAGGAAGGAGATCAAGTTAATGCAAACACCTAGTCCACGGTCACCAGGTCTTGGAAAAGTTACCAAAGATTCACCTTCAACCTAA 2169 0.4403 MEETFVPLRGIKNDLKARIPCYRQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGSLTAVQTLASTALCGVIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVEEFGAPKNQREGTNQVALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGSGWLRGFIADYGVPLMVLVWTAVSYIPVNEVPKGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQSMKEAYDEIQTPLVPQMPLTLGLKELKESTIELASSQGYLDAPVDELVFDVNKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTIAMFTVFQTLYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGPSNQAPTVNISGGEILDEVITRSRGEFRHTQSPKTTSSTPTSMGDIRPANSPQLTRRISSPPVTELRGESSLRPTRKEIKLMQTPSPRSPGLGKVTKDSPST 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01620 722 MobiDBLite consensus disorder prediction 650 686 - -
Gma06g01620 722 MobiDBLite consensus disorder prediction 643 722 - -
Gma06g01620 722 Pfam HCO3- transporter family 8 181 IPR011531 GO:0006820|GO:0016021
Gma06g01620 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Gma06g01620 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Gma06g01620 722 PANTHER BORON TRANSPORTER 2-RELATED 1 707 - -
Gma06g01620 722 PANTHER ANION EXCHANGE PROTEIN 1 707 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gma06g01620 722 Gene3D Helical hairpin bin 17 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01620 Gma-Chr6 15926904 15932810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01620 1 697 Antiporters AT3G62270 75.179 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01620 K24194 - gmx:100805633 1409.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01620 06 15926904 15932810 Gma06g01620 06 15926904 15932810 ECH
Gma04g01784 04 47740651 47746554 Gma06g01620 06 15926904 15932810 GST
Gma17g00834 17 7039814 7044571 Gma06g01620 06 15926904 15932810 PCT
Gma05g00363 05 3411953 3417110 Gma06g01620 06 15926904 15932810 PCT
Gma06g01620 06 15926904 15932810 Gma17g00834 17 7039814 7044571 PCT
Gma06g01620 06 15926904 15932810 Gma05g00363 05 3411953 3417110 PCT