Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01619 ATGGATCTTGAGACAATGTTCAAAGAAAGCTATGTCTCACAGCCAATGGACTTACAAGAAAGCTGCTTGCAACCTAGCATGAAAGATATGCTTCCTTTTGGGAATCTTCCATCTCATGGATTGTTTCAAGATTTTCACCATATTGATCAGTTTCATCACGTGAATGTCTCCTCATCCATCCAAACTCCAAATTTTGATGTTTTTGACAATTTCACCATTACAGGTTCATCACCTGATTTCGATTTTTATGAGTTTAAGCCTTTTGTGGAGGATGGTGGTAATGGGCATGGGCATGCTCATGTTATGGACAATTTCCTTTATGGAAATTATAGCTTGAACCTCCCTCCAAGGAATCAACTAGATATGATGGTTGCAAATCAAAGTTTTTTGCCTTTTAATCCTCAAGAAATCAAGCCCTCCAATTTTGTTGTACCGGATGAAGTTTCACGCATATCCCCGATGAATTATTACAAAAGAGTTGGCGAGAACAAAAATGACAAATCTTATCCAACCACTAGAAGAACATACAAAGTTCGCAAGAAGTCCAACGTAGTAAAGGGCCAGTGGACAATAGAAGAAGATGGGTTGTTGATTCAACTGGTGGAACAATATGGATTGAGGAAGTGGTCTCATATTGCTAAGATATTGCCCGGAAGAATTGGAAAACAGTGCAGAGAGAGATGGCATAACCATCTAAGGCCTGACATTAAGAAGGACACATGGACTGATGAAGAGGATAAAGTACTAATCGAAGCTCATGCTGAGGTAGGAAATAAATGGGCAGAGATTGCTAAAAAGTTGCCAGGAAGAACTGAGAACTCAATTAAGAACCATTGGAATGCAACCAAGAGAAGGCAATATTCCAGAAGAAAGTGTCGCTCAAAATACCCTAGAGGCACTCTTCTGCAAGAGTACATCAAGAGCTTGAACTTAGACAAGAACCCCCCAAGAGATTATAGGAGAAAATCTTCTTCTAATTATTCTAGTGCCATCATGAGTAACAACGAAACCACCACAAGCAAAGTCAGTACGACTGCACCAACTTTGCCCCAGACAGCATTTCAATTTTGTGCTGCCACTGATTGCTTGGCACCAAACTATGATTTTAATGTGGTCCCTGATTTCTTCTTTGGCGAGAATTTCTTTGAAGAAGGGTGTAGCATTGATTCTCTTCTGGATGGTGTGCCTTGTGCTCCTCTTATGGATAATATGAAAGATTTTGAAGGAAAATTGCAATGTGATGATCGTACAATGTGTGTTCCTTTTGTTAATATCGATGAGAATCATGTTGAGACAGAGATGCCACTTGAGATGATGGGGGTTGAAGTAAAGAAGGAGCTGGATTTGGTTGAGATGATGTCTCAGATTAGTAATGAAATTCTTCGTGTGTGA 1392 0.3973 MDLETMFKESYVSQPMDLQESCLQPSMKDMLPFGNLPSHGLFQDFHHIDQFHHVNVSSSIQTPNFDVFDNFTITGSSPDFDFYEFKPFVEDGGNGHGHAHVMDNFLYGNYSLNLPPRNQLDMMVANQSFLPFNPQEIKPSNFVVPDEVSRISPMNYYKRVGENKNDKSYPTTRRTYKVRKKSNVVKGQWTIEEDGLLIQLVEQYGLRKWSHIAKILPGRIGKQCRERWHNHLRPDIKKDTWTDEEDKVLIEAHAEVGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSRRKCRSKYPRGTLLQEYIKSLNLDKNPPRDYRRKSSSNYSSAIMSNNETTTSKVSTTAPTLPQTAFQFCAATDCLAPNYDFNVVPDFFFGENFFEEGCSIDSLLDGVPCAPLMDNMKDFEGKLQCDDRTMCVPFVNIDENHVETEMPLEMMGVEVKKELDLVEMMSQISNEILRV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01619 463 PANTHER BNAC03G62830D PROTEIN 118 312 - -
Gma06g01619 463 SUPERFAMILY Homeodomain-like 183 279 IPR009057 -
Gma06g01619 463 PANTHER MYB PROTEIN-RELATED 118 312 - -
Gma06g01619 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 237 287 IPR017930 -
Gma06g01619 463 Pfam Myb-like DNA-binding domain 189 247 - -
Gma06g01619 463 Gene3D - 185 237 - -
Gma06g01619 463 CDD SANT 240 283 IPR001005 -
Gma06g01619 463 ProSiteProfiles Myb-like domain profile. 233 283 IPR001005 -
Gma06g01619 463 SMART sant 237 285 IPR001005 -
Gma06g01619 463 SMART sant 185 234 IPR001005 -
Gma06g01619 463 ProSiteProfiles Myb-like domain profile. 181 232 IPR001005 -
Gma06g01619 463 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 236 IPR017930 -
Gma06g01619 463 Gene3D - 239 291 - -
Gma06g01619 463 CDD SANT 189 232 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01619 Gma-Chr6 15902776 15904721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01619 81 396 MYB Transcription Factor Family AT4G18770 49.706 6.41e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma06g01619 Myb_DNA-bind_6 6.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01619 K09422 - gmx:102662267 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01619 06 15902776 15904721 Gma04g01785 04 47785768 47787670 ECH
Gma06g01619 06 15902776 15904721 Gma06g01619 06 15902776 15904721 ECH
Gma17g00832 17 7026361 7028371 Gma06g01619 06 15902776 15904721 PCT
Gma05g00365 05 3427998 3429951 Gma06g01619 06 15902776 15904721 PCT