Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01606 ATGACTGGCTCAACCCTGTATCTTGACAACTTCAGGGATTCTTCTGACGCACACCAACCAAATGAGGAAATATGTTGCTCTGACTATCAATTTGTTTTCATGGGGGTGAAAGGATCTTGGACTCCTCTTCATGTTGATGTTTTTAGGTCCTATAGCTACCTTCAGTTGGTTTGTATGTGTGTGCTGGCTATCTGGTTAGAATGCACAGAAGATGCAGGTGAAATTATATTTGTTCCCAGTGGATGGTATCATCAATTTCATAATTTGGAGGATACGATATCTATAAACCACAATTGGTTCAATGCCTATAACCTTTCTTGGGTGCGGAATTTAGTTTTAAGGGACTACAATGAGGCCAAGGAATATATAGAAGACATCAAGGATATATGTGATGATTGA 399 0.391 MTGSTLYLDNFRDSSDAHQPNEEICCSDYQFVFMGVKGSWTPLHVDVFRSYSYLQLVCMCVLAIWLECTEDAGEIIFVPSGWYHQFHNLEDTISINHNWFNAYNLSWVRNLVLRDYNEAKEYIEDIKDICDD 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01606 132 Gene3D Cupin 6 59 - -
Gma06g01606 132 Gene3D Cupin 62 101 - -
Gma06g01606 132 Pfam JmjC domain, hydroxylase 67 99 IPR003347 -
Gma06g01606 132 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 7 58 - -
Gma06g01606 132 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE JMJD4 66 131 - -
Gma06g01606 132 ProSiteProfiles JmjC domain profile. 1 116 IPR003347 -
Gma06g01606 132 SUPERFAMILY Clavaminate synthase-like 23 125 - -
Gma06g01606 132 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 7 58 - -
Gma06g01606 132 CDD cupin_RmlC-like 72 92 - -
Gma06g01606 132 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 66 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01606 Gma-Chr6 15656251 15658126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01606 66 108 Glycosyltransferase AT1G78280 46.512 1.86e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma06g01606 JmjC 1.7e-07 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01606 - - gsj:114409851 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01606 06 15656251 15658126 Gma06g01606 06 15656251 15658126 ECH
Gma04g01801 04 48054638 48059695 Gma06g01606 06 15656251 15658126 GST