Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01589 ATGGAATCCAAACCCGGTCAAACTATCAAGCTCCTCTGCAGCTACGGCGGCAAGATTCTCCCTCGCGCCACCGACGGCGAACTCCGTTACGCTGGCGGCCACACCAGAGTCCTCACTGTCGCCCGTTCCATTTCCTTTTCAGAATTGATGGTGAAGCTAAGCGAGTTCTGTGGTTCGTCTGTGATCTTGCGGTGTCAATTGCCCAAGGGAGACTTGGAGACCTTGATCTCCATCACCAACGACGAAGATCTCGCTAGCATAATCGAAGAATACGACCGTGCCTCGTTGAAATTGGCGCATCCGTTGAAGATCAAAGCCGTTCTATCGCCGCCGAAATCGTCGAAGAAGACTCCGTCTGCTCCGTCGTCGGCGTCGTCCAGCGCCAGTCACTCTCCGTCCAGATCGCCGCACACCTCCACAGATTCGTTGCCGTACGCGGCGTACCACCGCATCGGCCGCCACAACCGGCCGCCTCCGGCGAAAGCTTCTTGCTACACGCAGTTCGATGGAAGCCCTAGGTTTCTGTACCGTGGACCTCACTGCAATTATTACTGCCACTGA 561 0.5633 MESKPGQTIKLLCSYGGKILPRATDGELRYAGGHTRVLTVARSISFSELMVKLSEFCGSSVILRCQLPKGDLETLISITNDEDLASIIEEYDRASLKLAHPLKIKAVLSPPKSSKKTPSAPSSASSSASHSPSRSPHTSTDSLPYAAYHRIGRHNRPPPAKASCYTQFDGSPRFLYRGPHCNYYCH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01589 186 PANTHER PB1 DOMAIN PROTEIN 1 186 - -
Gma06g01589 186 SMART PB1_new 23 111 IPR000270 GO:0005515
Gma06g01589 186 CDD PB1_UP2 12 99 - -
Gma06g01589 186 MobiDBLite consensus disorder prediction 112 142 - -
Gma06g01589 186 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Gma06g01589 186 MobiDBLite consensus disorder prediction 109 142 - -
Gma06g01589 186 Gene3D - 29 107 - -
Gma06g01589 186 PANTHER OS05G0427100 PROTEIN-RELATED 1 186 - -
Gma06g01589 186 SUPERFAMILY CAD & PB1 domains 25 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01589 Gma-Chr6 15431859 15433086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01589 7 118 MAP Kinase Kinase Kinase AT1G04700 42.857 6.53e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01589 - - gmx:100797123 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01589 06 15431859 15433086 Gma06g01589 06 15431859 15433086 ECH
Gma04g01820 04 48313208 48314021 Gma06g01589 06 15431859 15433086 GST
Gma17g00799 17 6694318 6695034 Gma06g01589 06 15431859 15433086 PCT
Gma06g01589 06 15431859 15433086 Gma17g00799 17 6694318 6695034 PCT