Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01578 ATGCCGCCGGATTCCTCCGAGCAAGACCTCGACGATCCCGACATCGAGTTCGTCGAGATTGATCCCACCGGTCGCTATGGTCGGTACAAGGAGGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAGTTGGAAGGGATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCGGATCTGTTGCGTAACTCCGATGATTTGGAGCGACTTTATTCAGAGGTTCATTTGCTCAAGACTTTGAAGCATAAAAATATAATTAAGTTTTACAATTCATGGGTTGACACCAAGAATGAGAACATCAACTTCATTACTGAAATTTTCACCTCAGGAACGTTGCGTCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTGTGAAGAAATGGTCTAGGCAGATTTTGGAAGGCCTTTTATATCTTCACAGTCACAATCCGCCGGTTATTCATCGAGACCTTAAGTGTGATAACATTTTTGTCAATGGTAATCAAGGGGAGGTGAAAATTGGTGATTTAGGATTGGCAGCTATCCTTCAACAAGCCAATTCAGCTCACAGTGTCATAGGTACCCCTGAGTTCATGGCCCCAGAACTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACCGTTGAGTACCCGTATATTGAATGCACCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCATTGGCAAAGGTGGCTGATCTTGAAGTTAAAGCATTTATCGAAAAGTGTATTGCTGATGTGTCGGAACGATTGTCTGCGAAAGACCTCTTGATCGATCCCTTCCTTCAGTCAGATTATGATAATGATAGTGTAGGTCGATCTTCAAGATCTCAAACCCATCATTCAGGAAATAATTCTCATAATCAAGCTATTGCTGAGGATAATTCTGTTGAGACAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAAAGATAATCATACAATATTTTTAAAATTGCGAATTGCAGATTCCTCAGGTAATATTCGCAATATCCACTTTCCTTTTGATACTGAAGCAGACACTTCAATCTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACTGATCAAGATGTTACAACTATTGCTGGGATGATTGATTCTGAAATTCGATATCACATTCCTAGTTGGAATTTCAGTGAAACTCCTGTTGACTTTAACCATCAAGATTCAAGTTATACCTCTGAAACTAGGCCAGAGGCCTCTCCTATGAAAATTGATTCTGTTGTTGCTCCTGGCAGTCTTGCATTAGAAATTTTACCTTCAGGTCGTAAGTACTGGTCAGATTCACCAAGGGGATTTGGTGGAAACTCTCCATCTCGACATATGACTTCAATCTTGTCTAATGAAGCAGGTGTGAACTCTGAGGAAGACAACCCGACTGCAAATGGTGGTATTTCAGCTGATGATTGTGTTGACGGTACCATTGAGCAGGAATGTGATGAGATAGCTGATTCTCCTTCCAGTGAGAAATCTGAAATGGAATACATCAATCAAATAACAACAAAATTGGAGAATTTGTTGGTTAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAACACAAACTAGCTGTCTCAGATCTTTTGATGGAAATTCCTCCAGAAATGTGCCAGAAGGTCCTAAATATATGCAACCTGCAGATGCCTGACAGTGAAATGGCCAGGCTTGCCCTTCATTAA 1755 0.4108 MPPDSSEQDLDDPDIEFVEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSDDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSRQILEGLLYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYIECTNAAQIYKKVTSGIKPASLAKVADLEVKAFIEKCIADVSERLSAKDLLIDPFLQSDYDNDSVGRSSRSQTHHSGNNSHNQAIAEDNSVETSREFTVEGQRKDNHTIFLKLRIADSSGNIRNIHFPFDTEADTSISVASEMVEELELTDQDVTTIAGMIDSEIRYHIPSWNFSETPVDFNHQDSSYTSETRPEASPMKIDSVVAPGSLALEILPSGRKYWSDSPRGFGGNSPSRHMTSILSNEAGVNSEEDNPTANGGISADDCVDGTIEQECDEIADSPSSEKSEMEYINQITTKLENLLVKQREELDELKRKHKLAVSDLLMEIPPEMCQKVLNICNLQMPDSEMARLALH 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01578 584 MobiDBLite consensus disorder prediction 292 328 - -
Gma06g01578 584 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01578 584 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Gma06g01578 584 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 575 - -
Gma06g01578 584 Coils Coil 525 552 - -
Gma06g01578 584 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01578 584 MobiDBLite consensus disorder prediction 292 321 - -
Gma06g01578 584 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gma06g01578 584 Gene3D - 336 425 - -
Gma06g01578 584 CDD STKc_WNK 25 285 - -
Gma06g01578 584 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01578 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Gma06g01578 584 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Gma06g01578 584 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 394 IPR024678 GO:0004674|GO:0005524
Gma06g01578 584 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01578 Gma-Chr6 15323884 15328215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01578 103 577 MAP Kinase Kinase Kinase AT3G48260 56.933 1.15e-171 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma06g01578 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01578 K08867 - gmx:100272204 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01578 06 15323884 15328215 Gma06g01578 06 15323884 15328215 ECH
Gma04g01831 04 48425293 48428909 Gma06g01578 06 15323884 15328215 GST