Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01528 ATGGGGTTTCATGACTTGGTTTTGCTATTCTGTTCAGCTTGGTGTGTGTTTTATGTGGGTAGTTGCAGTGCTCAGTTGCAATCCTCTCAGACTCAAGTTCTTCTCCAACTGAAAAAGCACTTGGAGTACCCAAAACAGTTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTCCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCACAATCTTGGGTGATGATAAGCCAACAACAAAGGGTAGAGATTTTGATGGGTTTGCCATTCCAAATCAAACACTATCAGAGAGCTTCTCCATGGACTCTCTTGTGGCCACTCTGGCAAGGTTAACCAGCCTGAGAGTCCTTAACCTTGTCTCTTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTCTATGCACTTGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGAGAACCTTCAAACTCTTAGATTGGTTGATAACTTCTTCAATGGTACCATCCCAAGCTTGTTCAATTCATCAAGCCACCTCACAGTTCTTAGTTTGAAGAGTAACAGGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCACCACTTTAACTGAAATTGACATGTCAAGCAATCAAATATCAGGTAGCTTGGAAGATTTGAGTGTCTTGAGTAGCTTGGAGGAACTAGATTTAAGGGAAAACAGGTTAGAGTCTAAACTACCTGCAATGCCAAAAGGGTTGATAAGTCTTTACCTCAGCAGAAACTCCTTCTCAGGTGAAATTCCCAAGCACTATGGTCAACTAAATAGGCTTGAGAAGCTTGATGTTTCCTTCAATTCACTCACAGGCACTGCTCCTTCTGAACTTTTTTCTTTGCCAAATATTAGTTACTTGAATTTGGCATCCAACATGTTGAATGGACCACTCCAAAACCACCTAAGATGTAGCAGCCAACTTAGATTTGTTGACATATCATACAATAGATTTGTGGGGGGCTTGCCTTCTTCACTGAACACTACTAAATCAGAAAAAATAGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAAGCTCATGTGAAGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTCTCATTGTGGGAATTCTTTTCATCATTGTGGTTTTGGCTTTGACCATAATTATAACTTGTAAAAGGTATTTCCCTTGGGGGGTGTCAGAGCAGCACCTATTGCATAAAACAGTTCAAGATAGCAGCTATGCAGCAGGGCTCTCCTCTGAGCTTGTCACAAATGCAAGGTATGTTTCTGAAGCTGAAAAGTTAGGCAGAGAGGACCTCCCCACATGTAGGTCATATTCCTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGACAACTCTACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAATTGGAGAGTGGAATACAGGTTGTAATAAGGTCCCTGCCTTTGTCAAAAAAGTATTCAATCAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTTCGTCACCCTCATTTGGTATCCCTCCTGGGGCACTGCATTGATGGTGTTGTAGGAGAGAATAATGAGGCAAATGTCTTTCTCATTTATGAATATGTGTCAAATGGGACTTTCCAGACTTATCTCTCTGGAGATAGTCCAGGCAAGGTTTTCAATTGGTCAGAGCGATTGTCTGTACTAATTAATGTTGCTAAGGCTGTTCACTTCCTACACACTGGCATGATACCTGGTTTCTTCAAAAATCGACTTAAGACCAACAATATCTTGCTGAATGAGAATTGGATGGCAAAGTTGAGTGACTATGGATTATCCATTATATCAGAAGAGACTGATGCATGTGGGGTAAAAGGAGAAAGTTCTGATTCATGGCAAATGAAAATGTTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCTTCATTATCAGCTAAAAGAGAAGCAAATGTGCTGAATGTAATGGCATCTTTCAATAGTCAAGATGGTTGGAAACAGGTTGTGGACCCAGTTTTGCAAGCTACATGTTCTAAAGAGTCTCTATTAGTTGTGATTTCCATAACAAACAAATGTATATCTTCTGAGTCATGGAGCCGACCATCCATTGAAGATGTCCTTTGGAACCTTCAATATGCATCTCAAATTCAGGGAACAGCTGATGGGGGATAA 2292 0.4071 MGFHDLVLLFCSAWCVFYVGSCSAQLQSSQTQVLLQLKKHLEYPKQLEIWRDRWTDLCSISSPGQVNVTCKDNFVTELTILGDDKPTTKGRDFDGFAIPNQTLSESFSMDSLVATLARLTSLRVLNLVSLGMWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMENLQTLRLVDNFFNGTIPSLFNSSSHLTVLSLKSNRLKGPFPPSILSVTTLTEIDMSSNQISGSLEDLSVLSSLEELDLRENRLESKLPAMPKGLISLYLSRNSFSGEIPKHYGQLNRLEKLDVSFNSLTGTAPSELFSLPNISYLNLASNMLNGPLQNHLRCSSQLRFVDISYNRFVGGLPSSLNTTKSEKIVVKSDGNCLSGSVQHQHAVSYCTEAHVKKKSYRVGIFVGLIVGILFIIVVLALTIIITCKRYFPWGVSEQHLLHKTVQDSSYAAGLSSELVTNARYVSEAEKLGREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLESGIQVVIRSLPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNEANVFLIYEYVSNGTFQTYLSGDSPGKVFNWSERLSVLINVAKAVHFLHTGMIPGFFKNRLKTNNILLNENWMAKLSDYGLSIISEETDACGVKGESSDSWQMKMLEDDVYSFGFILLEALVGPSLSAKREANVLNVMASFNSQDGWKQVVDPVLQATCSKESLLVVISITNKCISSESWSRPSIEDVLWNLQYASQIQGTADGG 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01528 763 Gene3D Ribonuclease Inhibitor 262 390 IPR032675 -
Gma06g01528 763 Gene3D Phosphorylase Kinase; domain 1 448 568 - -
Gma06g01528 763 SMART LRR_typ_2 283 307 IPR003591 -
Gma06g01528 763 SMART LRR_typ_2 238 261 IPR003591 -
Gma06g01528 763 SMART LRR_typ_2 143 167 IPR003591 -
Gma06g01528 763 Pfam Protein tyrosine and serine/threonine kinase 492 747 IPR001245 GO:0004672|GO:0006468
Gma06g01528 763 SUPERFAMILY Protein kinase-like (PK-like) 469 751 IPR011009 -
Gma06g01528 763 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Gma06g01528 763 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Gma06g01528 763 Gene3D Ribonuclease Inhibitor 27 261 IPR032675 -
Gma06g01528 763 PANTHER OS07G0166700 PROTEIN 4 762 IPR045272 GO:0004714|GO:0006468
Gma06g01528 763 PANTHER BNAA09G06560D PROTEIN 4 762 - -
Gma06g01528 763 SUPERFAMILY L domain-like 30 362 - -
Gma06g01528 763 ProSiteProfiles Leucine-rich repeat profile. 217 239 IPR001611 GO:0005515
Gma06g01528 763 ProSiteProfiles Protein kinase domain profile. 486 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01528 763 Gene3D Transferase(Phosphotransferase) domain 1 569 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01528 Gma-Chr6 14719542 14725195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01528 6 698 Miscellaneous Gene Families AT5G14210 50.000 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gma06g01528 PK_Tyr_Ser-Thr 3.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01528 - - gmx:100802978 1451.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01528 06 14719542 14725195 Gma04g01883 04 49073103 49077315 ECH
Gma06g01528 06 14719542 14725195 Gma06g01528 06 14719542 14725195 ECH
Gma04g01883 04 49073103 49077315 Gma06g01528 06 14719542 14725195 GST