Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01526 ATGTCCGCTCTCACATCTCTCTCACTCTCTCTTCGCACACTCTCCCTCCGTCCCAAACCAACCACACTTTCCGCTTCACTCTCTGCAATCCCAGGAAGTAGCGATGGATCTAAAACCAAGGTACCTCCCCGCAAAAGAAGAACGGGCAGAATAGAAGGCCCTAGAAAAAGCATGGAAGATTCTGTTCAACGAAAGATGGAGCAGTTTTACGAAGGCTCCGATGGGCCTCCGCTTCGCATTCTCCCCATTGGCGGTTTGGGAGAAATTGGGATGAATTGCATGCTCGTCGGGAACAATGACCGCTATATCCTTATTGATGCCGGTGTCATGTTTCCAGATTATGACGAGCTTGGAGTTCAAAAGATTATACCTGATACCACATTTATAAGAAAGTGGAGCCACAAGATTGAAGCACTTATCATAACGCATGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATTCCGGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATAAAAAAACGTTTGAAGGAACATGGTATTTTTGTTCCATCTAGACTCAAAGTATTTAGAACAAGGAAGAAGTTTGTGGCTGGGCCATTTGAGATAGAACCCATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGGCTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCACTTGATGGGAAAGTTTTTGATCGTGAAGCTTTAGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATTAGTGAATCTGTTGTGGCAGATGCATTGTTGAGACATATTTCAGCATCTAAAGGAAGGGTTATTACAACCCAGTTTGCGTCAAATCTACATCGGCTTGGTAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCTTTAAGGACTTATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCACGTGCTGCCTTGAACCTCGCATCTTATGGAAGTAGTCATGCTTTCAAACTAGCCAAGGAAGATGTTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTAATGAAAATGCTAAACCGCATATCGGAGATTGGATCAACAATTGTTATGGGAAAAAATGAAGGTTTGCACACATCTGGCCATGCATATCGTGGAGAATTGGAAGAAATACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATCCATGGAGAACTTTTGTTCCTGAAGGAACATGAATTACTTGGAAAATCAACTGGGATTCGGCACACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTCCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGTGATAGAGCATTTGGTACATCTAGTGATCTCTTCATTGATGAAAGATTGAGAATTGCATTAGATGGCATCATTGTCATTAGCATGGAAATATTTCGCCCTAAAATTTTAGATGGTTCAGCTGAAAACACCTTGAAAGGGAAGATAAGGATTACCACGAGATGCTTATGGCTTGACAAAGGGAAGCTGATGGATGCACTCTACAAAGCAGCCCGTGCAGCTCTTTCAAGCTGCCCTGTAAAGAGTCCACTGGCTCACATCGAAAGAATTGTGTCTGAGGTATTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGCCATTGCCATAGAAAAACCTGCGGCCATTCTTGCTGATGAGATAAACACAAAATTGTCTGGCAAATCCCATGTGGGTCTTGGAATGTCAACATTAAGTAAAGCAGTGGATGGACATGGGAAGGGAAATCAGTCCACTGCACTGCAGGTTAAAGATGATAGTATTGATAAtgcaagtggagctgagggtgatttatctgaggaagacaacactgcaagtgggcctgagggttatttatctgaggaagacaacactgcaagtggagccgagggtgatttatctgagTCAGAGGATTCAGATGAATTTTGGAAACCATTCATTACATCATTACCAGTTGAGAAGTCAATCAATGCTGACAATGGTTATGTTTCACCAAAGGAGCAAAAATCCAATTTGAAGAAAGATGATTCTGAAGACATTGATGAAGCCAAGTCAGAAGAAACATCTAATTCTGAAGCCAAGTCTTCAAAATCAGTTAAGAGAAATAAATGGAAAACTGAGGAAGTTAAGAAGCTAATTGGTATGCGTGAGGAACTAAGTGAAAGATTTCAAGTTGTGAAGGGAAGGATGGCCCTCTGGGAAGAGATTTCTCAAAAATTGTTGGCTGATGGGATCTGCAGAAGTCCTGGACAGTGCAAATCTCTGTGGACATCTTTGGTAGTCAAATATGAGGGGATCAAGAATGAGGATAGGAAGAAAAGTTGGCCATACATAGAGGACATGGAAAGGATAATGTCTGATAAAGAAGCCCCTGCAAAATGA 2655 0.3974 MSALTSLSLSLRTLSLRPKPTTLSASLSAIPGSSDGSKTKVPPRKRRTGRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRILPIGGLGEIGMNCMLVGNNDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALIITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFVPSRLKVFRTRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLAKEDVVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEILRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDRAFGTSSDLFIDERLRIALDGIIVISMEIFRPKILDGSAENTLKGKIRITTRCLWLDKGKLMDALYKAARAALSSCPVKSPLAHIERIVSEVLRKMVRKYSGKRPEVIAIAIEKPAAILADEINTKLSGKSHVGLGMSTLSKAVDGHGKGNQSTALQVKDDSIDNASGAEGDLSEEDNTASGPEGYLSEEDNTASGAEGDLSESEDSDEFWKPFITSLPVEKSINADNGYVSPKEQKSNLKKDDSEDIDEAKSEETSNSEAKSSKSVKRNKWKTEEVKKLIGMREELSERFQVVKGRMALWEEISQKLLADGICRSPGQCKSLWTSLVVKYEGIKNEDRKKSWPYIEDMERIMSDKEAPAK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01526 884 MobiDBLite consensus disorder prediction 39 57 - -
Gma06g01526 884 Gene3D - 279 429 IPR042173 -
Gma06g01526 884 Coils Coil 757 777 - -
Gma06g01526 884 ProSiteProfiles Myb-like domain profile. 787 851 IPR001005 -
Gma06g01526 884 CDD RNaseJ_MBL-fold 81 492 - -
Gma06g01526 884 SMART Lactamase_B_5a 90 287 IPR001279 -
Gma06g01526 884 MobiDBLite consensus disorder prediction 749 791 - -
Gma06g01526 884 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 435 472 IPR011108 -
Gma06g01526 884 MobiDBLite consensus disorder prediction 25 57 - -
Gma06g01526 884 CDD GT1 793 858 - -
Gma06g01526 884 Gene3D - 82 494 IPR036866 -
Gma06g01526 884 MobiDBLite consensus disorder prediction 668 684 - -
Gma06g01526 884 Pfam Myb/SANT-like DNA-binding domain 792 875 IPR044822 -
Gma06g01526 884 Pfam Metallo-beta-lactamase superfamily 91 235 IPR001279 -
Gma06g01526 884 PANTHER RIBONUCLEASE J 1 881 - -
Gma06g01526 884 Gene3D - 795 855 - -
Gma06g01526 884 MobiDBLite consensus disorder prediction 667 735 - -
Gma06g01526 884 MobiDBLite consensus disorder prediction 759 791 - -
Gma06g01526 884 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 881 - -
Gma06g01526 884 SUPERFAMILY Metallo-hydrolase/oxidoreductase 78 492 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01526 Gma-Chr6 14698396 14707701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01526 794 879 Trihelix Transcription Factor Family AT2G38250 37.079 6.98e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma06g01526 Lactamase_B 6e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01526 - - gmx:100779771 1710.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01526 06 14698396 14707701 Gma06g01526 06 14698396 14707701 ECH
Gma04g01886 04 49103583 49118856 Gma06g01526 06 14698396 14707701 GST
Gma17g01193 17 10470702 10479464 Gma06g01526 06 14698396 14707701 PCT
Gma06g01526 06 14698396 14707701 Gma17g01193 17 10470702 10479464 PCT