Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01522 ATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCCAACAGTAACAAAAGGCCTTCTTCTTCTTCTTCTTCTTCCGAAGACAAGACTCCTTCTCCTCCCCCTAAGCGCCAAAAGGTCGACAATGGTGCTGCCACGTCGGAGAAACCGATGCCGGCGGCGGAAAATTCCAAGGAATTGAGCACGCTGGAGCCTCCCGCTGACCCCGGAGAATGCGCCGTTCAGGACGCGCAGATCGCCGGCGCAGCAAGTTCCGACGGCAAGGCCGAAGCTACTCCGCCGATCGCCGATGGTTCTACACCGACTGTGGTGGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGAGGGTACATCCGAAGCAAAACCCAAATTTTGAACCTTCAGTTCCATGGTGCAGACTCTTGTCTCAGTCCGCGCAGAATCCGAATGTTTTAATTTCCACACCCAGCTTTACTATTGGCTCAAGTAGGAGTTGCAATTTTTCGTTGAAGGATCAGACTATAAGTGCAAATTTGTGCAAGATCAAGCACACGCAGCGCGAGGGAAATGTCGTGGCTGTGCTAGAAAGTATGGGCAGCAAAGGATCGGTCGTAGTGAATGGGACTCTCGTCAAGAGGAGTGCCAGCTGCGTGCTTAACTCGGGGGATGAGGTGGTTTTTGGTTTGCTGGGGAATCATTCTTATATTTTTCAGCAAATAAATCCCGAAGTTACAGTTAAGGCTGCAGAAATTCAGGGTGGTGCTGGCAAGTTTTTTCAGTTTGAGAGAAGGGCCGGAGACCCTTCAGCTGTGGCCGGAGCTTCTATTTTGGCTTCTCTTTCTAGCCTCAGACCAGAGCTTACAAGATGGAAATCTCCATCTCAGACTGCCCATAAACCTCAGCAGGGTACTGATGTTTCTAGTCATTCTGTTTTCCCCGATGGTACAGAAACTGAGCTTGATGGCCTGGAAGGCAACTCAGCTCCAAATGTAGCGACTGATAAAGCTTTTGATGTTGGAGCAAGCGACAAGAATTCACCTATGGATTGTGTTCCAGATGATGCAGGCGCAGAGGCAGGCAATGTATTTGAAGAAAGAAATGGGACGAGGGATGCGCAAGCTGCATCGACTTCGAGTGCTTCTGTACGCTGTGCTGTTTTTAAAGAAGATGTCCATGCTGCAATACTGGATGGGAAAGAAATAGAAGTGTCCTTTGACAACTTCCCATACTACTTGAGTGAGAATACAAAAACTGTCCTAATTGCAGCTTGCATTATACACCTGAAGCATAAAGAACATGCGAAGTACACCACAGATCTTACAACCATAAACCCTCGTATTTTACTCTCAGGACCTGCAGGGTCGGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCACTTTTGGGTGGTTTATCCTCCAAGGAAGCAGAGCTGCTCAAAGATGGATTTAATGCTGAGAAATTCTGCGCCTACGCTAAAAGTCCTTCATCCTCAGACATGGCCAGATGCATGGATCCATCAGCTAGTGAACCAGATACACCAAACTCCTCAAATGCACCCACTCCATATGGCTTTGAGTCTCAACCCAAGTTAGAAGCTGATAATGTACCATCTACCTCTGGGACAGCTAAAAATTGTGTGTTTAAACTAGGTGACAGGGTAAAATATAGTTCATCTTCTGGGGGCTTGTATCAGCTTCAGACAATTTCTTCAAAGGGTCCAGCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAGATTGGCGTAAGATTTGATAAACCCATACCTGATGGAGTTGATCTTGGAGGTTTGTGTGAGGGTGGTCAAGGATTTTTCTGCAATGTCACCGATCTTCGATTGGAAAACAGTGGCATTGAAGAACTTGACAGATTACTTATTAATACATTGTTTGAGGTTGTGGTTAGTGAGAGCAGAAATGCACCTTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATAGGTTCACACACTCACACTGACAGTCGAAAGGAGAAGTCACATCCTGGAGGTTTGCTTTTTACAAAGTTCGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCCGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAAGCCCCAAAGCCAAACAAAACCTTAACTAAGCTTTTCCCAAATAAAGTGACTATTCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTCGATCGAGATGTTGAGACTCTTAAAATTAAAGAAAATTTGCACAATTTACGCACAGTTTTGAGCCGTTGTGGGGTGGAATGTGAAGGACTTGAGACCTTGTGCATTAGGAATCAGACACTTAGTATTGAAAATGCAGAGAAGATAGTTGGTTGGGCTTTAAGCTGCCATCTCATGCAGAATGCTGAAACTGACCCTGATGCAAAACTCGTGTTGTCTTGTAAGAGCATCCAGTATGGGGTTGGGATCTTACATGCTACCCAGAATGAGTCAAAAATCCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAACGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAATGACATTGGTGTTACTTTCGATGATATTGGAGCTCTTGAAAATGTCAAGGATACATTGAAGGAATTGGTTATGCTTCCTTTACAAAGGCCAGAGCTATTTTGCAAAGGGCAATTAACCAAGCCGTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAGACAATGCTTGCAAAGGCAGTTGCTACCGAAGCTGGTGCAAATTTCATCAACATTTCCATGTCAAGTATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATACGTGAAAGCTGTTTTTTCCCTGGCAAGTAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACAAAGGATACCGAGCGAGTTCTTGTACTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAGGCTGTCATACGGAGGCTGCCTCGGAGATTAATGGTAAATTTGCCCGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTTGAAAAAGAGGACTTGTCTTCTGATATTGATATGGATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAGAAAAAGGAACAGGCTGCTGCTGTATCAGAAGGTAGACCTGCTCCAGCATTAAGTGGAAGTGGAGATATCCGATCTTTAAACATGGAAGATTTCAAATATGCTCATCAACAGGTATGTGCAAGTGTTTCATCTGAATCCATAAATATGACCGAGCTTCAACAATGGAACGAACTATACGGTGAAGGTGGTTCAAGAGTAAAAAAAGCACTAAGCTATTTTATGTGA 3621 0.4394 MVSTRRNSGSFSNSNKRPSSSSSSSEDKTPSPPPKRQKVDNGAATSEKPMPAAENSKELSTLEPPADPGECAVQDAQIAGAASSDGKAEATPPIADGSTPTVVADKPRGSFSSWRVHPKQNPNFEPSVPWCRLLSQSAQNPNVLISTPSFTIGSSRSCNFSLKDQTISANLCKIKHTQREGNVVAVLESMGSKGSVVVNGTLVKRSASCVLNSGDEVVFGLLGNHSYIFQQINPEVTVKAAEIQGGAGKFFQFERRAGDPSAVAGASILASLSSLRPELTRWKSPSQTAHKPQQGTDVSSHSVFPDGTETELDGLEGNSAPNVATDKAFDVGASDKNSPMDCVPDDAGAEAGNVFEERNGTRDAQAASTSSASVRCAVFKEDVHAAILDGKEIEVSFDNFPYYLSENTKTVLIAACIIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHSLLGGLSSKEAELLKDGFNAEKFCAYAKSPSSSDMARCMDPSASEPDTPNSSNAPTPYGFESQPKLEADNVPSTSGTAKNCVFKLGDRVKYSSSSGGLYQLQTISSKGPANGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGLCEGGQGFFCNVTDLRLENSGIEELDRLLINTLFEVVVSESRNAPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEAPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKENLHNLRTVLSRCGVECEGLETLCIRNQTLSIENAEKIVGWALSCHLMQNAETDPDAKLVLSCKSIQYGVGILHATQNESKILKKSLKDVVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILEKEDLSSDIDMDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKEQAAAVSEGRPAPALSGSGDIRSLNMEDFKYAHQQVCASVSSESINMTELQQWNELYGEGGSRVKKALSYFM 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01522 1206 Gene3D - 129 237 - -
Gma06g01522 1206 MobiDBLite consensus disorder prediction 1 30 - -
Gma06g01522 1206 Gene3D - 900 1181 IPR027417 -
Gma06g01522 1206 SUPERFAMILY SMAD/FHA domain 129 229 IPR008984 GO:0005515
Gma06g01522 1206 Pfam FHA domain 151 220 IPR000253 GO:0005515
Gma06g01522 1206 ProSitePatterns AAA-protein family signature. 1045 1064 IPR003960 GO:0005524|GO:0016887
Gma06g01522 1206 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 77 1206 - -
Gma06g01522 1206 SMART AAA_5 938 1075 IPR003593 -
Gma06g01522 1206 MobiDBLite consensus disorder prediction 1 102 - -
Gma06g01522 1206 CDD AAA 940 1073 - -
Gma06g01522 1206 MobiDBLite consensus disorder prediction 281 303 - -
Gma06g01522 1206 Gene3D - 1074 1168 - -
Gma06g01522 1206 Pfam ATPase family associated with various cellular activities (AAA) 942 1071 IPR003959 GO:0005524|GO:0016887
Gma06g01522 1206 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 77 1206 - -
Gma06g01522 1206 Pfam AAA+ lid domain 1095 1130 IPR041569 -
Gma06g01522 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1180 IPR027417 -
Gma06g01522 1206 CDD FHA 130 230 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01522 Gma-Chr6 14661950 14682119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01522 901 1150 Calmodulin-binding Proteins AT3G56690 41.245 2.66e-43 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01522 - - gmx:100778164 2311.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01522 06 14661950 14682119 Gma06g01522 06 14661950 14682119 ECH
Gma04g01889 04 49130289 49154305 Gma06g01522 06 14661950 14682119 GST
Gma17g01200 17 10548167 10560499 Gma06g01522 06 14661950 14682119 PCT
Gma05g00445 05 4230856 4248403 Gma06g01522 06 14661950 14682119 PCT
Gma06g01522 06 14661950 14682119 Gma17g01200 17 10548167 10560499 PCT
Gma06g01522 06 14661950 14682119 Gma05g00445 05 4230856 4248403 PCT