Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01489 ATGTCTAGCATTGAACTTAACGTAAAGCAGCAAGGAGAACCAACCCGGGTTCAGCCTGCACAGGAAACAGAAAAGGGACTCTACTTCCTTTCAAACCTAGACCAGAACATTGCTGTTCCAGTGCGCACGGTTTATTGCTTCAAATCCGGTTCTAGAGGAAACGAGGATGCTGCACAAGTTATCAAGGAAGCCTTGTCGAAAATTCTTGTCCCTTATTACCCCATGGCTGGCACGTTGATGATAAGCTTGGAAGGGAAGTTAATAGTGGATAACCCTGGGGAGGGTGCGGTGTTCGTTGAGGCTGAAGCAGATTGTGACATTGAAGAGATTGGGGACTTGACAAAGCCTGACCCTGATGCTCTTGGGAAACTGGTGTACAATGTTCCTGGTGCTCGAAGCATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTTACATTGGGGCTATGCATGATCCACTGCATGAAAGATGGACTATGTGCCATGGAGTTCGTGAATGCATGGAGCGAGACAGCCCGAGGTTTGGACTTGAAGACCCCACCATTTCTCGATCGAACCATAATCAAAGCACGCGACCCTCCCAAGATAGAGTTCCAACACAACGAATTCGCCCAAATAGAAGACATATCAAACACTAAAAAACTCTACGAGGAAGAAAACATGCTCTACAGATCCTTCTGCTTCGATTCTGAGAAGCTCGACATGCTCAAGAAAAAGGCCACGGAAGATGGGGTTCTGGAAAAGTGCTCCACTTTTGAAGCACTCTCAGGTTTTGTATGGAGAGCTCGAACTGCAGCATTAAGAATGCAACCTGATCAACAAACAAAGCTTTTGTTCGCGGTAGATGGAAGGTCAAGATTTGTGCCACCAATACCAAAAGGGTACTTTGGGAATGCTATTGTGCTGACAAATTCGTTGTGTAATGCTGGGGAGTTATTGAAGAACCCTTTATCATTTTCTGTGGGATTGATTCGTGAGGCTATTGAGATGGTCACGGATAGTTACATGAGATCTGCCATTGACTATTTTGAAGTCACAAGAGCTAGGCCTTCTTTAGCAGCTACCCTTTTGATCACAACTTGGACTAAGTTGTCTTTTCACACTACAGATTTTGGCTGGGGAGAACCTCTTTGTTCTGGCCCTGTGACCCTGCCAGAGAAAGAAGTTATCTTGTTCTTGTCACATGGTCAAGAAAGGAAAAGTGTAAATGTTCTTCTGGGTTTGCCAAGTTCTGCTATGGAAATTTTTGAAGCATTGGTGATGATGCAGGTGTGA 1296 0.4498 MSSIELNVKQQGEPTRVQPAQETEKGLYFLSNLDQNIAVPVRTVYCFKSGSRGNEDAAQVIKEALSKILVPYYPMAGTLMISLEGKLIVDNPGEGAVFVEAEADCDIEEIGDLTKPDPDALGKLVYNVPGARSILEMPLMTVQVTKFKCGGFTLGLCMIHCMKDGLCAMEFVNAWSETARGLDLKTPPFLDRTIIKARDPPKIEFQHNEFAQIEDISNTKKLYEEENMLYRSFCFDSEKLDMLKKKATEDGVLEKCSTFEALSGFVWRARTAALRMQPDQQTKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSLCNAGELLKNPLSFSVGLIREAIEMVTDSYMRSAIDYFEVTRARPSLAATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGQERKSVNVLLGLPSSAMEIFEALVMMQV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01489 431 Gene3D - 211 428 IPR023213 -
Gma06g01489 431 Gene3D - 10 210 IPR023213 -
Gma06g01489 431 MobiDBLite consensus disorder prediction 1 20 - -
Gma06g01489 431 Pfam Transferase family 15 424 - -
Gma06g01489 431 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 8 427 - -
Gma06g01489 431 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 427 - -
Gma06g01489 431 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01489 Gma-Chr6 14341639 14345327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01489 4 428 Monolignol Biosynthesis Gene Families AT5G48930 37.415 2.75e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01489 K15400 - gmx:100794490 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01489 06 14341639 14345327 Gma06g01489 06 14341639 14345327 ECH