Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01479 ATGGGTTGCGTGCTCGGGACGCCGGCCGGTGCCGGACATCAGCGCCGCCGCCGCCGCCGTAGCGAGAAGCCCGACGGAGCAGCCGACGAAGCTAATAATGCAGTTAGGGTTCGAGAAAAGGAGAGGAACCGGCACACCGGCGATTTTCCGGGGACTCTTCCGGCGGCAGAGCGCCGGAAACCTAGACTCGATCCGTGCGCCGTCACGCAACAGGGATGGCCTTCGTGGCTGATGGCCGTCGCCGGCGAAGCCATCGGAGACTGGACTCCTCGTCGCGCCAACACCTTCGAGAAGCTCGCTAAGattgggcaagggacgtatagtaatgtgtataaggcaagggaccttgtgacggggaagatagtggcattgaagaaagtgagatttgataatttggagccagagagtgtgaagttcatggcaagagagatacttgttttgaggaggcttgatcaccccaatgttgtgaagcttgagggtttggttacttctagaatgtcgtgtagtctctatttggtgtttgagtatatggagcatgatcttgcagggcttgctgctggtcaaggtgtcaagttcactgaacctcaggttaaatgctttatgaagcaattactctctggtcttgagcattgtcacagccggggggtgttgcaccgtgatatcaagggctccaatctgcttattgacaatgaaggaatccttaaaattgcagattttggactggcaactttttatgatcctaagataaaacaggcaatgacaagcagagttgtgaccctttggtatcgtccccctgagctgcttctaggggctacagtttatggtgttggtattgatctttggagtgctggttgcattttggcagagctgcttgctggaaagccaataatgcctggccgaacagaggttgaacaactgcacaaaatatttaagttgtgcggctctccatctgaggaatactggaggaagtatagattgccaaatgctactatctttaagccacagcagccatataaacgttgcatcttagaaacatacaaggactttcctccatcttcactacctctaattgaaacccttcttgcaatagatcctgatgatcgttgcactgcctcagcagcactaaATAGTGAAttctttaccacagagccctatgcttgtgaaccatcaagtttgccaaagtatcctcccagcaaagaattggatgtaaaaCTGAGAGATGAGGAAGCAAGAAGGCAAAAGGCTTTAAATGGGAAAGCTAGTGCAGTTGATGGTGCCAAAAAAGTCAGAGTACGTGAGCGTGGCAGGGCTGTTCCGGCCCCTGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCTCCTCATCAAGATGGAGCTGTTGGATACCCACAAGATGCATCAAATAAAGGACCTGTTTCATTTGGCGCCCCTGACACTTCCTTTTCTTCAGGGATATTTAATTCGAAACCTTCTGGAACGGTTAGGAATCATGGTGCTGCAGGGCTTCACAGAGGGAGGAAAACTAAGAAAGATGAGTCCCAGATGGCGTCATCATGGAAATTCATGCGTCCATTCAAGCCATCAACAGTTGGACTTTCCATGGATTTATTATTTAGGAGCAAATAA 1680 0.2446 MGCVLGTPAGAGHQRRRRRRSEKPDGAADEANNAVRVREKERNRHTGDFPGTLPAAERRKPRLDPCAVTQQGWPSWLMAVAGEAIGDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDPKIKQAMTSRVVTLWYRPPELLLGATVYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKYRLPNATIFKPQQPYKRCILETYKDFPPSSLPLIETLLAIDPDDRCTASAALNSEFFTTEPYACEPSSLPKYPPSKELDVKLRDEEARRQKALNGKASAVDGAKKVRVRERGRAVPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPQDASNKGPVSFGAPDTSFSSGIFNSKPSGTVRNHGAAGLHRGRKTKKDESQMASSWKFMRPFKPSTVGLSMDLLFRSK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01479 559 ProSiteProfiles Protein kinase domain profile. 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01479 559 Pfam Protein kinase domain 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01479 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Gma06g01479 559 Coils Coil 555 559 - -
Gma06g01479 559 MobiDBLite consensus disorder prediction 1 58 - -
Gma06g01479 559 MobiDBLite consensus disorder prediction 21 47 - -
Gma06g01479 559 Gene3D Transferase(Phosphotransferase) domain 1 179 420 - -
Gma06g01479 559 MobiDBLite consensus disorder prediction 491 512 - -
Gma06g01479 559 SMART serkin_6 96 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01479 559 SUPERFAMILY Protein kinase-like (PK-like) 90 385 IPR011009 -
Gma06g01479 559 CDD STKc_CDK9_like 96 380 - -
Gma06g01479 559 PANTHER CELL DIVISION PROTEIN KINASE 68 539 - -
Gma06g01479 559 MobiDBLite consensus disorder prediction 462 534 - -
Gma06g01479 559 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Gma06g01479 559 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 68 539 - -
Gma06g01479 559 Gene3D Phosphorylase Kinase; domain 1 83 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01479 Gma-Chr6 14202347 14206800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01479 88 414 Core Cell Cycle Gene Families AT5G10270 51.312 7.55e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma06g01479 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01479 K08819 - gmx:100807756 1130.16