Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01470 ATGCAAGAAAAATGTGAAGTACAGAAAAAGGAATTTCAGGGTAAAGGTGAAGTGGAAAAGGAGGAAGAGGCTGAGGCCCCTTTGACTCTAAGCGTTACTTCCAAGGTTTTGAACATGTTGGGAGACATCACAGCAGGGCCTGCATCTATGTTCGCGCAATGGCTCCAATTAGTTCGTAAACGCACTTCTAACAGTCGCACTTCTGGCTTCCCTCACCGTTCTTCCAGCATGCCTTCTAGCCCGGGAGAATCTATTGAGGACGCAAAGAATGATCAGCAAACAGAGTTTAGTTTGTGGGAGAGGCTTGGTAAAGCTGAAATGTTGGACATTGAGTCAAGCTCATTTTCTTGGGACAGACTCTCTTCACTTCACCACACCGAACATACTAGCAGCAATGAACATTCTGAGGATGAAATAAACCGCGCTCTTGAGGTAACAGTAAATTCTGGAGGGGTGGTCTTCTTTGCCTTTTTCAATGGTTTTGGGAACGACGATGCCTCTCCAAAAGAAGCAGCCGCTGTTATAAAGATATCATCTTCAAGAATGGCAACGCAATCCGAACGTCTTGGTTACGAATTTGCCAAACAGTTGGGAGTCCAAACTCCGCAGGCTAGAGTCATCCACAATACAAGTTTAGAGTGGACCCAAATAAAGGAAGCTACAGAAAAAGCAAGGGATGTTGCAAGTTCTGCAGGCGATGAAGTTGGTgaaatgacatgcacagtgtcaacggaattaaatgccacagcaaattgtatgagattgcacagttatttTTATGTGCACAGTTCACCCTTGCTTGAAAGCACTACAGCATTTGAATCACAGGAACTTGCAGAACGAACATCAGCTGCCCTTGACAGGATAATGTTGTTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCCGCAAATTTGTTATTGGCTGAAAAGATAATCTCAGGTACAGATACAGCAGGAGAAACTCCTGATTCTGCAATGAACTCATATGGACAGAGAGCAAACAGGGCACTTCAAAAAGAAAAAAGTTTTAAAAGTCAAACGTCATTAGAATCAATGCTTACCAACTTTATTGTGGCCATTGATTCTGGCGTTCCTCGTCGACCCCCTGTTGGAAAACGAACAGATGATCAGGTTAGTTATCCTAAGTTGGTCGAGTTACTACTCAATAGCTCAGAGTTTTCCTCTAACCTGTTACATGATATAACTGGAGGGAGACTAGGATTTCCTCATGAAGACACAAATACAATCACTGATGTCCATCATACTACTGATGTAACATCAGTCGTTCATGTGTTCCGTAGTGGTTTTCGTGCTGCTCTCAGGGATCTGCAGGGATTCCATATATTCCTACTCACACTGCATCAAAAACTAGATAATTTGTTAAGATCATTTATGAATGCTATAGGCAAAATATCATCAGGGGAGTCTGAAAAAGAGGATGCAGTGGTTCCTGGCTCAGCTTCACCCACTGTTTTTGGTAGTTGTCCCTCTCCATCTAGTAAAGAAAGGCTTTCTAATGATATCCATCAAGATTGTAGTGATTCAGAATCTCAGAGAACTGCTCCAAGGGCATCATCATCTTCAGGCAAAAGAGATTGTTGTGACTCTGCTTCTTCCGTGTCAAGAGAAGGTTGGCATGGAAAACACTCTAAAGGAAGTGCGGATTCACTTCGTGCTCTCCGCTTGACAACCAAGCTCCGTGACTTACATAAACTTGCCAAGGTTGATTCAGAATCCCATAAAGAATTTGAACACTGGAATGAAATGCTTAAAAATGATGCGGTCAAGTTATGTTTGGAGCATAATTTTAACACAGGATTTTTTGAGGGTTGTGAGAACAACACTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCCTGCATATCTGAGGCTGCGAATACAGAGAAACCATCTGCGGTTACAAATAGTCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTACATACACACTGCAACGCTTGGGAATCACGCATATTTTATGTTTGTGTACAAATGAAATTGGCCAATCAGATTCTCAATTTCCTGATCTATTCATGTACACAAATTTCTCTGTGTGTGACACTGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCCTGTGATTTTATAGACTATGTTGAACAAGCTGGTCGGAGTATTTTAGTCCATTGCTTCGAGGGGAAAAGCCGAAGTGCCACTTTAGTCCTTGCTTACCTAATGCTTAGAAAGAAATTCACTTTGTTAGAAGCATGGAGTGCTCTAAAACGAGTTCATCGCCGATCTCAGCCCAACGATGGTTTTGCAAAGATCTTACTTGAGCTGGACCTGAAACTGCATGGGAAGGTTTCAATGGAGTGGCAGCAACGGAAACCAATGATGAAAGTTTGCCCCATCTGTGGCAAGAATGCTGGACTAAGCAGTAGCTCTCTTAAACTCCATCTTCAGAAATCACTCAAAAGGCTGTCATCAGGAAGCGTAGATAGTGCCATGACAATGGAGATTCAGAAGGCATTAACAACTTTGAAGATTAGCCGTGGTGGGAGTGTCAGTCCCAAACCAAGGAAGTCTCATTCAACGATAGAAGCATAG 2649 0.419 MQEKCEVQKKEFQGKGEVEKEEEAEAPLTLSVTSKVLNMLGDITAGPASMFAQWLQLVRKRTSNSRTSGFPHRSSSMPSSPGESIEDAKNDQQTEFSLWERLGKAEMLDIESSSFSWDRLSSLHHTEHTSSNEHSEDEINRALEVTVNSGGVVFFAFFNGFGNDDASPKEAAAVIKISSSRMATQSERLGYEFAKQLGVQTPQARVIHNTSLEWTQIKEATEKARDVASSAGDEVGEMTCTVSTELNATANCMRLHSYFYVHSSPLLESTTAFESQELAERTSAALDRIMLLDLVIRNEDRLPCRQLRWRGNSANLLLAEKIISGTDTAGETPDSAMNSYGQRANRALQKEKSFKSQTSLESMLTNFIVAIDSGVPRRPPVGKRTDDQVSYPKLVELLLNSSEFSSNLLHDITGGRLGFPHEDTNTITDVHHTTDVTSVVHVFRSGFRAALRDLQGFHIFLLTLHQKLDNLLRSFMNAIGKISSGESEKEDAVVPGSASPTVFGSCPSPSSKERLSNDIHQDCSDSESQRTAPRASSSSGKRDCCDSASSVSREGWHGKHSKGSADSLRALRLTTKLRDLHKLAKVDSESHKEFEHWNEMLKNDAVKLCLEHNFNTGFFEGCENNTVVDAYELKVRLEHILERIACISEAANTEKPSAVTNSLFIGGALAARSTYTLQRLGITHILCLCTNEIGQSDSQFPDLFMYTNFSVCDTEDSNISSIFEEACDFIDYVEQAGRSILVHCFEGKSRSATLVLAYLMLRKKFTLLEAWSALKRVHRRSQPNDGFAKILLELDLKLHGKVSMEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSLKRLSSGSVDSAMTMEIQKALTTLKISRGGSVSPKPRKSHSTIEA 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01470 882 Gene3D Protein tyrosine phosphatase superfamily 638 810 IPR029021 -
Gma06g01470 882 ProSitePatterns Tyrosine specific protein phosphatases active site. 742 752 IPR016130 GO:0016311|GO:0016791
Gma06g01470 882 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 655 800 IPR029021 -
Gma06g01470 882 Pfam Dual specificity phosphatase, catalytic domain 669 794 IPR000340 GO:0008138|GO:0016311
Gma06g01470 882 Pfam Actin-fragmin kinase, catalytic 95 351 IPR015275 -
Gma06g01470 882 ProSiteProfiles Dual specificity protein phosphatase domain profile. 655 800 IPR020422 GO:0006470|GO:0008138
Gma06g01470 882 MobiDBLite consensus disorder prediction 528 546 - -
Gma06g01470 882 Gene3D - 265 376 IPR036940 GO:0016301
Gma06g01470 882 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 17 353 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gma06g01470 882 SUPERFAMILY Protein kinase-like (PK-like) 53 388 IPR011009 -
Gma06g01470 882 MobiDBLite consensus disorder prediction 1 24 - -
Gma06g01470 882 MobiDBLite consensus disorder prediction 63 92 - -
Gma06g01470 882 MobiDBLite consensus disorder prediction 63 87 - -
Gma06g01470 882 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 356 881 IPR035010 GO:0004721|GO:0009737|GO:0043622
Gma06g01470 882 SMART dsp_5 655 797 IPR020422 GO:0006470|GO:0008138
Gma06g01470 882 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 356 881 - -
Gma06g01470 882 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 17 353 - -
Gma06g01470 882 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 724 776 IPR000387 GO:0016311|GO:0016791
Gma06g01470 882 MobiDBLite consensus disorder prediction 486 563 - -
Gma06g01470 882 CDD DSP 656 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01470 Gma-Chr6 14051491 14063070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01470 22 866 Protein tyrosine phosphatase (PTP) family AT5G23720 59.866 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01470 K14165 - gmx:102661225 1437.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01470 06 14051491 14063070 Gma06g01470 06 14051491 14063070 ECH