Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01466 ATGGCATCATCGGAGGTGACGATGAAGGGAAATTGCTTGAACCACAACGACGGCGGAGCCACGGAGCCTCATTCGCCGTCCACGGCCAAAGACGCAGAAGCTGCACTTTTCAGGGAACTATGGCACGCATGTGCCGGTCCTCTAGTCACGGTACCGCGGGAAAAAGAGCGCGTGTTTTATTTCCCTCAAGGACATATTGAGCAGGTGGAGGCGTCGACGAATCAGGTGGCGGACCAGCACATGCCGGTTTACGATCTCCCACCCAAGATCCTTTGTCGGGTCATCAACGTGCAGCTGAAGGCCGAGCCCGACACGGATGAGGTGTTTGCTCAGGTGACTTTGCTTCCGGAGCCAAACCAAGATGAGAATGCCGTGGAGAAAGAGCCACCACCACCTCCGCCACCACGGTTTCATGTTCATTCTTTCTGTAAGACTCTGACGGCGTCCGATACGAGTACCCATGGTGGGTTTTCTGTGCTGAGACGACATGCTGATGAATGTCTTCCTCCTCTGGATATGTCGAAGCAGCCACCCACACAGGAATTGGTGGCTAAGGATCTTCATGCAAATGAATGGCGATTTAAACATATCTTTCGAGgtcaaccgcgtagacacttgcttcagagtggttggagtgtttttgtcagctccaaaaggcttgttgctggggatgcatttatatttcttagaggtgaaaatggggaacttcgtgttggtgtccgacgtgcaatgagacagcagggtaatgttccatcctcagttatctcaagccACAGCATGCATCTCGGTGTCCTTGCAACTGCTTGGCATGCCATCTTGACCGGGACCATCTTCACTGTTTATTACAAACCTAGGACCAGTCCCGCCGAATTTATTGTTCCGTATGATCAATATATGGAGTCTTTAAAAAATAGTTATAGCATCGGGATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGGCTCCAGAGCAGAGGTTTACTGGTACCGTTGTTGGAATAGAAGATTCTGATCCCAAAAGGTGGAGAGATTCCAAATGGAGATGCCTCAAGGTGAGATGGGATGAAACATCCAACACCCCTCGGCCAGAGAGAGTTTCCCCTTGGAAAATAGAGCCGGCTCTTGCTCCCCCGGCTCTAAATCCTCTTTCAATGCCCAGGCCTAAAAGGCCTCGGTCTAATGCAGTTCCTTCATCCCCAGATTCTTCTGTTCTTACTCGAGAAGCATCATCTAAAGTAAGCATAGACCCTTCACCGGCAAATGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTACAGAAAGTAACGAGTTTGATACTGCCGAGAAGTCTGTTGTTTGGCCACCTACTGCAGTAGATGATGAAAAGATGGATGTTTCTACTTCAAGGAGGTATGGTTCAGAGAGCTGGATGTCAATGGGGAGGAATGAGCCTACATATTCGGATCTTCTTTCAGGCTTTGGGACCAGTGGGGATCCTTCTCATTCATCCCTGAAGGATCAAATGAGCCCTGCTTATTCTGCTAGAAAGCAATCATTGGATCATGAAGGCAAACTTCACATGCCTCATCCGTGGCCTGTAATGCCCTCTAGTCTGTCCCTGAACATCTTGGACTCTAATGCAAAAGGTCCTACACATGGTGGTGATACATCTTTCCAAGCTCGAGGGAATTTGAGGTTCAGTGCATTTGGTGAATACCCTGCACTGCATGGTCATAAAGTTGAGGATTCACATGGAAACTTGATGCCACCCCCACCTGCACCCCAAACTCAATATCAGAGTCCTTGTTCAAGAGAGCTTATGTCAAAACATGTATCAGCAAAAACTTGTGAGGCTGTGAAACCAAAAGATGGTGACTGTAAGCTATTTGGCTTCTCACTTATCAGTGGCCCTATCGTACCAGAGCCTTCTTTATCACAAAGAAATGTGAGTGAGCCTGCTGGTCAGATGCATCTTACAGCACACCAACAAAGAACATCTGAAAATGATGAGAAGTCAGATCACTCAAAGGGATCAAGACCTGTAGATGATCTAGTTGTTGATGACCATGACAGACCATTACAGACTTCTCAGTCGCATACTAAAGACGTTCAAGCCAAACCTCTCAGTGGTTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGCATTGCACTTGGTAGATCAGTGGACCTTACAAAGTACAGTGGCTATGATGAATTAGTTGCCGAATTGGATCAGCTGTTTGAATTTGGGGGTGAATTATTGTCAACTAAAAAAGATTGGCTTATCGTCTATACTGATAATGAGGGTGATATGATGCTTGTAGGCGATGATCCATGGCAGGAATTCTGTGCCATGGTTTGCAAAATTTATATCTACCCTAAAGAGGAGATCCAGAAAATGAGCCCAGGTACACTGAGCTCGAAAAATGAAGAGAACCAGTCGGTGATGGCTAGTGATGGTGCAGATGCAAAAGTTGTTAAATGTCAGCCACATCAAAAGTTCAATTCAGAAAATGGCCTTGACGCCTAA 2532 0.4364 MASSEVTMKGNCLNHNDGGATEPHSPSTAKDAEAALFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREASSKVSIDPSPANGFPRVLQGQEFSTLRGNFTESNEFDTAEKSVVWPPTAVDDEKMDVSTSRRYGSESWMSMGRNEPTYSDLLSGFGTSGDPSHSSLKDQMSPAYSARKQSLDHEGKLHMPHPWPVMPSSLSLNILDSNAKGPTHGGDTSFQARGNLRFSAFGEYPALHGHKVEDSHGNLMPPPPAPQTQYQSPCSRELMSKHVSAKTCEAVKPKDGDCKLFGFSLISGPIVPEPSLSQRNVSEPAGQMHLTAHQQRTSENDEKSDHSKGSRPVDDLVVDDHDRPLQTSQSHTKDVQAKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVCKIYIYPKEEIQKMSPGTLSSKNEENQSVMASDGADAKVVKCQPHQKFNSENGLDA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01466 843 MobiDBLite consensus disorder prediction 803 843 - -
Gma06g01466 843 ProSiteProfiles PB1 domain profile. 713 795 IPR000270 GO:0005515
Gma06g01466 843 MobiDBLite consensus disorder prediction 663 696 - -
Gma06g01466 843 MobiDBLite consensus disorder prediction 493 518 - -
Gma06g01466 843 SMART B3_2 142 244 IPR003340 GO:0003677
Gma06g01466 843 SUPERFAMILY CAD & PB1 domains 715 790 - -
Gma06g01466 843 Gene3D - 139 244 IPR015300 -
Gma06g01466 843 MobiDBLite consensus disorder prediction 697 711 - -
Gma06g01466 843 ProSiteProfiles B3 DNA-binding domain profile. 142 244 IPR003340 GO:0003677
Gma06g01466 843 Gene3D - 305 375 - -
Gma06g01466 843 PANTHER AUXIN RESPONSE FACTOR 2 16 821 - -
Gma06g01466 843 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 821 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma06g01466 843 MobiDBLite consensus disorder prediction 493 514 - -
Gma06g01466 843 Pfam B3 DNA binding domain 142 243 IPR003340 GO:0003677
Gma06g01466 843 Gene3D - 709 802 - -
Gma06g01466 843 MobiDBLite consensus disorder prediction 376 424 - -
Gma06g01466 843 MobiDBLite consensus disorder prediction 394 416 - -
Gma06g01466 843 MobiDBLite consensus disorder prediction 656 711 - -
Gma06g01466 843 MobiDBLite consensus disorder prediction 803 817 - -
Gma06g01466 843 SUPERFAMILY DNA-binding pseudobarrel domain 138 271 IPR015300 -
Gma06g01466 843 Pfam Auxin response factor 268 350 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma06g01466 843 Pfam AUX/IAA family 754 798 IPR033389 -
Gma06g01466 843 CDD B3_DNA 140 242 IPR003340 GO:0003677
Gma06g01466 843 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01466 Gma-Chr6 14019250 14024198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01466 1 828 B3 DNA Binding Superfamily AT5G62000 64.658 0.0 1077
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma06g01466 AUX_IAA 1.9e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01466 - - gmx:100803498 1716.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01466 06 14019250 14024198 Gma06g01466 06 14019250 14024198 ECH
Gma04g01940 04 49809549 49814099 Gma06g01466 06 14019250 14024198 GST
Gma05g01973 05 41074783 41080023 Gma06g01466 06 14019250 14024198 PCT
Gma08g00076 08 661000 666526 Gma06g01466 06 14019250 14024198 PCT
Gma06g01466 06 14019250 14024198 Gma17g01204 17 10587387 10589612 PCT
Gma06g01466 06 14019250 14024198 Gma05g00449 05 4276168 4278816 PCT