Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01464 ATGCAGCTCCAGTGCATGGAAGAGAGTTCAGAATCGTTACGCTCGAGATGTTTCAAGGAAGGGCTTGGAGAGGCATATGATGGAGACATTGCAATTGCAAGTGCCCTTGAAAATTTTGGAGGAGGGCATAATGATCCTCTATTTGTAACTTTGGGAGGACCTGTCGTGACCAAATTTTCTATTGCTTTGAGAGAAATCAGTACATACAAGGAACTTCTTCGGTCCCAGGCAGAGCACATGCTGAATGACCGGTTACTAAACATGCTAAATGTCGATATCCTAGATGTCAAGGAAGCTAGAAGGCGTTTTGAGAAAGCTTCCCTTGTACATGATCAGGGACGTGAGAAGTTTATGTCATTGAGAAAAAGCACTAGGATGGATATTGCCACTGTCGTAGAAGAGGATTTGCACAATGCAAGAACCTCATTGGAGGAAGCTCGTTTCAATCTGGTTAGTGCTCTCCATAATGTTGAGGCCAAGAAGAGATTTGAGTTTTTGGAGGCTGTCACTGGAGATATGGATGCTCATCTTCAGTATTATCGACAGGTATATGATGACACGCTATTACATGAGATGGAGCCTTTCATTATCGAGGTTTTGGCTTATACACAAAAGGCAAGAGAAAGTTACAATGAGGAGCAAATTAGCCTTTGTGAAAGAATGTTGGAGTACAAAAAACATGTTAATCATGAAAGTATGTTGTCCTTGAATGGTCCTTATGACTCTCCCTGTAGAGATGGTCAAGTGCAGCCTTTTTCTAGGATATCAAATAAAGTGGCAGATGCTATAACAGAATCTGCTGAAAATGGAAAGGTTCAAATCATTCGACAAGGATTTCTTTCAAAACGGTCCACAAATCTGAGGGGCGACTGGAAGAGAAGGTATTTTGTTCTTGATAGTCGCGGAATGCTTTACTACTTTCGTAAACCATGGAGTGGATTACATTCAGATGACTCTGAAAGCAGTGACTGTTACTCTGCCAACAAGATGTATTTGTTAAAAGGTTCTCCTGATGATGATCCTGCAGTGAGTGGGGATTCTATAAAAAATGAAAAGCCAATTGAAGTTCTTAGAAAGGTTGGCGGGAATGACAAATGTGCTGATTGTGGTAAACCTGATCCAGATTGGGCATCCTTAAACCTTGGCATCCTTATTTGCATTGAATGTTCAGGTGTTCACCGTAATCTTGTGTTAACCATGTTTCAGTCACTGGGGAATCTTTTTGCAAACTCAGTTTGGAAGGAACTGTTGCATTCAACAAGTACTTCGCAAACTGATGACACTCCCGATGGTTCATTCAAGACACACAAAAAGTTATTTCATGCAAGAAAACCAGCACATGATGATCCTCTTTCACTAAAGGAGAGGTTCATTCATGCAAAGCTTTCAACGGCACAAGAAGTGGCAGAAAGCACCAGTGCCAATGACAAGAAAGCAGTGTACAGACACGTTGTGAAGTCAGATGTGGATGTCATTGCTATTAGTGGGGAAGCAGGTTTTTCTTCCAACATGACTTCTTCAACTAATCCAAACACATCATGTAAAACTAAGACTCAACAAGAGGAGGATATACAAGATGGCTCTAGTGTGCTTCACCTGAGGGAGGACACCTCTACATTACAGCACTATGAGAGGGGAGAGTGCAATTACAAAAGTGCTTTAGTACAAGGGGGGCCAATCCACTTGCCGGAGACAAAGAAGGCAACACTCCTTTTAAGCTTGCACCGGAACCTGACACTGTTGTCAAAGATACTCTTGCTCTAA 1764 0.4189 MQLQCMEESSESLRSRCFKEGLGEAYDGDIAIASALENFGGGHNDPLFVTLGGPVVTKFSIALREISTYKELLRSQAEHMLNDRLLNMLNVDILDVKEARRRFEKASLVHDQGREKFMSLRKSTRMDIATVVEEDLHNARTSLEEARFNLVSALHNVEAKKRFEFLEAVTGDMDAHLQYYRQVYDDTLLHEMEPFIIEVLAYTQKARESYNEEQISLCERMLEYKKHVNHESMLSLNGPYDSPCRDGQVQPFSRISNKVADAITESAENGKVQIIRQGFLSKRSTNLRGDWKRRYFVLDSRGMLYYFRKPWSGLHSDDSESSDCYSANKMYLLKGSPDDDPAVSGDSIKNEKPIEVLRKVGGNDKCADCGKPDPDWASLNLGILICIECSGVHRNLVLTMFQSLGNLFANSVWKELLHSTSTSQTDDTPDGSFKTHKKLFHARKPAHDDPLSLKERFIHAKLSTAQEVAESTSANDKKAVYRHVVKSDVDVIAISGEAGFSSNMTSSTNPNTSCKTKTQQEEDIQDGSSVLHLREDTSTLQHYERGECNYKSALVQGGPIHLPETKKATLLLSLHRNLTLLSKILLL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01464 587 MobiDBLite consensus disorder prediction 500 522 - -
Gma06g01464 587 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 2 320 - -
Gma06g01464 587 SUPERFAMILY PH domain-like 233 310 - -
Gma06g01464 587 SUPERFAMILY BAR/IMD domain-like 3 296 IPR027267 -
Gma06g01464 587 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 346 534 - -
Gma06g01464 587 PANTHER CENTAURIN/ARF 346 534 IPR045258 GO:0005096
Gma06g01464 587 Pfam BAR domain of APPL family 57 213 - -
Gma06g01464 587 Gene3D - 259 342 IPR011993 -
Gma06g01464 587 PANTHER CENTAURIN/ARF 2 320 IPR045258 GO:0005096
Gma06g01464 587 ProSiteProfiles ARF GTPase-activating proteins domain profile. 351 415 IPR001164 GO:0005096
Gma06g01464 587 Gene3D Arf GTPase activating protein 343 471 IPR038508 -
Gma06g01464 587 MobiDBLite consensus disorder prediction 500 518 - -
Gma06g01464 587 Pfam Putative GTPase activating protein for Arf 353 405 IPR001164 GO:0005096
Gma06g01464 587 CDD BAR_SFC_plant 2 195 IPR035670 -
Gma06g01464 587 PRINTS HIV Rev interacting protein signature 363 382 IPR001164 GO:0005096
Gma06g01464 587 PRINTS HIV Rev interacting protein signature 382 399 IPR001164 GO:0005096
Gma06g01464 587 Gene3D Arfaptin homology (AH) domain/BAR domain 1 230 IPR027267 -
Gma06g01464 587 SUPERFAMILY ArfGap/RecO-like zinc finger 350 425 IPR037278 -
Gma06g01464 587 CDD ArfGap 354 461 - -
Gma06g01464 587 ProSiteProfiles PH domain profile. 273 309 IPR001849 -
Gma06g01464 587 SMART arf_gap_3 351 448 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01464 Gma-Chr6 13982752 13990299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01464 354 396 C2H2 Transcription Factor Family AT3G07940 62.791 1.17e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01464 K12489 - gmx:100797073 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01464 06 13982752 13990299 Gma04g01942 04 49847314 49854982 ECH
Gma06g01464 06 13982752 13990299 Gma06g01464 06 13982752 13990299 ECH
Gma04g01942 04 49847314 49854982 Gma06g01464 06 13982752 13990299 GST
Gma05g01972 05 41040378 41054295 Gma06g01464 06 13982752 13990299 PCT
Gma06g01464 06 13982752 13990299 Gma05g01972 05 41040378 41054295 PCT