Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01455 ATGGATCCAGACGCATTCACCGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTCCCGCCCGCGCCCCCCCCGCCGCCCCCGCGACCTCCCCTCCTCGAATACGCGGTCGCTCCGCCGCCAGTGACCCCGTCGTTCCATCCCTCGAGGGCGGCGGCGCCGCGCGAGCTCGGAGGACTGGAGGAGCTCTTTCAGGCTTACGGCATCCGCTACTACACGGCGGCGAAGATCGCCGAGCTCGGGTTCACGGTCAGCACGCTGGTGGACATGAAGGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGACCTCCTCGTCGGCGAACGCTACGGCATCAAAGCCGCCGTCAGAGCCGAACGACGCCGCGTTGAAGATGACGACATCAAGCGCCGCAATAACAACAACAACCTCCTCTCCGCCGACACCACCACCAACGCCCTCGACGCCCTCTCTCAAGAAGGCTTGTCGGAGGAGCCGGTGATGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAGCACGTGGGAGGTGGTGGTGGCGGCGGAGGAGAGGAGGAAGCAGCAGAGGAGACGGAGGACGAGGATGAAGACGAATAATCTTCATCACGAAGACAACGAGGAGCTTGAGGATGATGAAGGAGAACAGAATGACGAAGGAAACATTAACACTGGTGGGGGTTGTGAGAGGCAAAGGGAGCATCCTTTCATCGTGACAGAGCCTGGGGAAGTTGCACGTGGAAAGAAGAACGGTTTGGACTATCTGTTTCATCTCTACGAGCAATGCCGTGAGTTCTTGATGCAGGTTCAGGCCATTGCCAAGGACCGCGGTGAAAAATGCCCCACCAAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAGGCTGGGGCAAGCTACATCAACAAGCCAAAGATGCGACACTACGTGCACTGCTATGCCTTACACTGTCTGGACGAGGAGGTCTCAAACGAGCTTCGAAGGGCGTTCAAGGAGAGAGGGGAGAACGTTGGAGCGTGGAGGCAAGCATGTTACAAGCCCCTTGTGGCCATTGCCGCGCGTCAAGGTTGGGACATTGACGCCATATTCAATGCTCATCCTCGTCTTTCCATTTGGTATGTTCCCACGAAGCTTCGTCAGCTTTGTCACGCTGAGAGAAACAGTGCCGCAGCTTCAAGCTCCGTGTCTGCTGGCAGTGCTCACCTTCCCTTCTAA 1230 0.5854 MDPDAFTASLFKWDPRTVLPPAPPPPPPRPPLLEYAVAPPPVTPSFHPSRAAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRVEDDDIKRRNNNNNLLSADTTTNALDALSQEGLSEEPVMQREKEAVGSGGGSTWEVVVAAEERRKQQRRRRTRMKTNNLHHEDNEELEDDEGEQNDEGNINTGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSAGSAHLPF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01455 409 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 230 395 IPR035209 GO:0003677
Gma06g01455 409 Coils Coil 185 205 - -
Gma06g01455 409 MobiDBLite consensus disorder prediction 190 236 - -
Gma06g01455 409 Gene3D Protein LEAFY 232 401 IPR038276 -
Gma06g01455 409 Pfam Floricaula / Leafy protein SAM domain 56 132 IPR035079 -
Gma06g01455 409 PANTHER PROTEIN LEAFY 1 409 IPR002910 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01455 Gma-Chr6 13861246 13863940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01455 1 393 Orphan Transcription Factor Family AT5G61850 66.420 1.89e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Gma06g01455 C_LFY_FLO 5.9e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01455 - - gmx:100798196 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01455 06 13861246 13863940 Gma06g01455 06 13861246 13863940 ECH
Gma04g01952 04 49985781 49986080 Gma06g01455 06 13861246 13863940 GST