Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01428 ATGGAGATGAGGAAATCATGTGGCTTCTTCTTGTTGCTCCTCCTCCTTGTCTTTGCTTCCCAGGTGGTGGTGCAGACGGAGGGAAGAGTGTGTGAGTCACAAAGCCACGGGTTCCATGGTTTGTGTAATAGAGACCACAACTGTGCTTTGGTCTGCAGGAACGAAGGTTTCTCCGGTGGCAGGTGCAAAGGCTTCCGCCGCCGCTGCTTTTGCACCAGGATTTGTTGA 228 0.5263 MEMRKSCGFFLLLLLLVFASQVVVQTEGRVCESQSHGFHGLCNRDHNCALVCRNEGFSGGRCKGFRRRCFCTRIC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01428 75 Pfam Gamma-thionin family 29 75 - -
Gma06g01428 75 PANTHER DEFENSIN-LIKE PROTEIN 4 75 - -
Gma06g01428 75 Gene3D - 29 75 IPR036574 -
Gma06g01428 75 PANTHER DEFENSIN-LIKE PROTEIN 1 4 75 - -
Gma06g01428 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Gma06g01428 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
Gma06g01428 75 SMART gth_4 30 75 IPR003614 GO:0006952
Gma06g01428 75 CDD Knot1 40 72 IPR003614 GO:0006952
Gma06g01428 75 PRINTS Purothionin signature 30 45 IPR008176 GO:0006952
Gma06g01428 75 PRINTS Purothionin signature 60 74 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01428 Gma-Chr6 13574788 13575949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01428 1 75 Plant Defensins Gene Families AT5G63660 60.000 2.84e-27 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01428 - - gmx:547938 134.035