Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01419 ATGGCCGCAGAAATTTGTGGCGGGTCTCTATTCTTATCCGTTAAAACTCAACTGCAACAGCGAAACCAGCAAAATGTGTTCTTCCATGCTCAACGTAGCAGAACGCGAAGAAGCACTACCAGATTCCACTCATCCAAATGCTGCTTTAGTTCTTCCGCCTTTCCAAATGCGTCCCCGTTTCGCCGCGGCGCAGTGTGCCGGGTCGCCAGCACCGACTTCGAATCCTCCGCCAAAGCAGGCGAGGATCGTCTCTCTAAGGTGCCGGTGCGTAATATAAGGAACTTCTGCATCATTGCGCATATTGACCACGGGAAATCCACGTTGGCGGATAAGTTGCTTCAGGTTACCGGCACGGTGCAGCAGCGAGAAATGAAGGATCAGTTTCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCCAGAATGCGTTATGTGTTTGAAAATGAACCTTATTGCTTGAATCTAATAGACACTCCAGGGCATGTTGACTTCTCGTATGAGGTTTCTCGGTCACTCGCTGCATGTGAGGGTGCTCTTCTAGTAGTAGACGCTTCTCAGGGCGTTGAAGCACAAACACTAGCTAATGTTTATTTGGCTTTGGAGAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTCCCAGGTGCAGAACCAGATCGAGTTATCAAGGAGATTGAAGAGATTGTAGGTCTAGATTGTAGCAATGCGATTCTCTGCTCTgcaaagGAAGGAATAGGTATAATTGAAATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGAAGATACATCTAAAAGACCATTGAGGGCTTTAATATTTGACAGCTACTACGATCCATATAGAGGTGTTATTGTATACTTTCGAGTTGTAGATGGGACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTATCTCCCAGTCAACTACAAGTTGAAGAATTGTATGCTGGTGAGGTGGGCTATCTATCTGCATCAATAAGAACAGTAGCTGATGCTAGAGTGGGTGACACTATTACTCACTATGGCAGAAAGGCTGACAATTCTCTCCCTGGATATGAGGAAGCCACTCCTATGGTGTTCTGTGGGTTGTTTCCTGTTGATGCTGACCAATTCCCTGATCTGCGTGATGCACTTGAAAAGCTACAACTCAATGATGCTGCACTTAAGtttgaacctgagacatcaagtgccatgggatttggctttagatgtgggtttctgggccttcttcatatggaaattgttcaggagaggcttgagagagaatacaatttgagcctaataacaactgctccaagtgttgtgtacagagttgaatgctcaaatccatctttacttcctgagcctggaaaaaggaaatcaattgaggagccatttgttaagattgagatgcttacaccaaaggactacattggtccacttatggaactggcacaagaaagaagagggcagttcaaagaaatgaaatttattgctgaaaatagggcatcaatcacgtatgaattaccattagcagagatggttggtgatttctttgaccagttgaagtcaagaagtaagggttatgctagtatggagtatacctttgtcgggtacattgaaagtaatttaattaaacttgacatacggataaatggtgactgtgtggagccattggctacaattgtgcacaatgataagGCATATTCGGTGGGAAGGGCTTTGACTCTAAAGTTGAAGGAGCTAATACCACGACAAATGTTTAAAGTACCAATTCAAGCGTGCATAGGATCAAAAGTGATTGCTAGTGAAGCGATATCTGCAATAAGGAAGGATGTACTAGCCAAATGCTACGGTGGGGATATTTCAAGAAAAAAGAAATTGCTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAGTCTATTGGTAAAGTTGATGTGCCCCAAGAAGCTTTCATGGCAGTTTTGAAACTTGAAAAGGAGGTAATATGA 2040 0.3255 MAAEICGGSLFLSVKTQLQQRNQQNVFFHAQRSRTRRSTTRFHSSKCCFSSSAFPNASPFRRGAVCRVASTDFESSAKAGEDRLSKVPVRNIRNFCIIAHIDHGKSTLADKLLQVTGTVQQREMKDQFLDNMDLERERGITIKLQAARMRYVFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIEILNAIVARIPPPEDTSKRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPSQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGPLMELAQERRGQFKEMKFIAENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFVGYIESNLIKLDIRINGDCVEPLATIVHNDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEAISAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01419 679 Pfam Elongation factor G C-terminus 478 562 IPR000640 -
Gma06g01419 679 CDD LepA 93 270 - -
Gma06g01419 679 SUPERFAMILY EF-G C-terminal domain-like 379 457 IPR035647 -
Gma06g01419 679 CDD EF4_II 278 363 - -
Gma06g01419 679 Hamap Elongation factor 4 [lepA]. 87 677 IPR006297 GO:0005525
Gma06g01419 679 Gene3D - 89 272 IPR027417 -
Gma06g01419 679 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 90 271 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 Gene3D - 455 557 - -
Gma06g01419 679 Pfam Elongation factor Tu domain 2 292 362 IPR004161 GO:0005525
Gma06g01419 679 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 79 673 - -
Gma06g01419 679 PANTHER TRANSLATION FACTOR GUF1-RELATED 79 673 IPR006297 GO:0005525
Gma06g01419 679 TIGRFAM small_GTP: small GTP-binding protein domain 93 262 IPR005225 GO:0005525
Gma06g01419 679 PRINTS GTP-binding elongation factor signature 94 107 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 PRINTS GTP-binding elongation factor signature 213 222 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 PRINTS GTP-binding elongation factor signature 137 145 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 84 676 IPR027518 -
Gma06g01419 679 SMART EFG_C_a 477 565 IPR000640 -
Gma06g01419 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 295 IPR027417 -
Gma06g01419 679 SUPERFAMILY Translation proteins 269 374 IPR009000 -
Gma06g01419 679 CDD EF4_III 380 455 - -
Gma06g01419 679 Pfam Elongation factor Tu GTP binding domain 91 268 IPR000795 GO:0003924|GO:0005525
Gma06g01419 679 SUPERFAMILY EF-G C-terminal domain-like 478 572 IPR035647 -
Gma06g01419 679 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 130 145 IPR031157 -
Gma06g01419 679 CDD lepA_C 480 559 IPR035654 -
Gma06g01419 679 TIGRFAM lepA: elongation factor 4 91 674 IPR006297 GO:0005525
Gma06g01419 679 Gene3D Translation factors 273 372 - -
Gma06g01419 679 Pfam GTP-binding protein LepA C-terminus 567 673 IPR013842 -
Gma06g01419 679 Gene3D - 559 633 IPR038363 -
Gma06g01419 679 Gene3D Elongation Factor G (Translational Gtpase), domain 3 373 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01419 Gma-Chr6 13475354 13485185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01419 90 333 Eukaryotic Initiation Factors Gene Family AT3G22980 33.463 2.07e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01419 K21594 - gmx:100784073 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01997 04 50391767 50401151 Gma06g01419 06 13475354 13485185 GST