Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01405 ATGAGTGAATTTCGTTTGATGCTGCAGTTACCCAGGGAGATAACGCACGAGAATGTTGTGAAGCTTGTGAAAGTTCACATTAATCACATGGACATGTCTCTTTATCTGGCTTTTGATTATGCAGAACACGACCTCTATGAAATAATAAAGCATCATTGGGACAAAGTCAACCAATCCATTAACCAGTATACTGTTAAATCGTTACTCTGGCAGTTGCTCAATGGACTAAACTATCTACACAGTAATTGGACAATATATCGGAACCTAAAGCCATCAAATATACTGGTTATGGGTGAAGGAGAGGAACATGGAATTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAAGCACCTTTGAAGCCATTATTTGAAAATGGGGTGGAAATATCTGTGAAATCCATGCTCAGTGCACTTGTACCCTGCCAACCTGGAGAGACATTTGTGAATTATCCCACGTGTCCAGTGGATACAACAACAGATTTTGAAGGGGCAGCCAACATGCAACCTTCACAGACGGATGTTCTGTCAAAGGTTTATTGCATTGAGCACAGGAAACTGGATGCTATTATAATGAAGAGTACTGCTGGAACACTAATGGAGCCCTTGGAAGGGAATAAACATAGGAAATCGGTGAGCTACTGGAGGCACGTGTATATAATGCTTTAG 672 0.4062 MSEFRLMLQLPREITHENVVKLVKVHINHMDMSLYLAFDYAEHDLYEIIKHHWDKVNQSINQYTVKSLLWQLLNGLNYLHSNWTIYRNLKPSNILVMGEGEEHGIVKIADFGLARIYQAPLKPLFENGVEISVKSMLSALVPCQPGETFVNYPTCPVDTTTDFEGAANMQPSQTDVLSKVYCIEHRKLDAIIMKSTAGTLMEPLEGNKHRKSVSYWRHVYIML 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01405 223 SUPERFAMILY Protein kinase-like (PK-like) 9 119 IPR011009 -
Gma06g01405 223 PANTHER CYCLIN-DEPENDENT KINASE E-1 138 180 - -
Gma06g01405 223 PANTHER CYCLIN-DEPENDENT KINASE E-1 9 120 - -
Gma06g01405 223 ProSiteProfiles Protein kinase domain profile. 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01405 223 Gene3D Transferase(Phosphotransferase) domain 1 38 174 - -
Gma06g01405 223 SMART serkin_6 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01405 223 Pfam Protein kinase domain 9 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01405 223 PANTHER CELL DIVISION PROTEIN KINASE 9 120 - -
Gma06g01405 223 PANTHER CELL DIVISION PROTEIN KINASE 138 180 - -
Gma06g01405 223 Gene3D Phosphorylase Kinase; domain 1 3 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01405 Gma-Chr6 13290298 13295610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01405 138 174 Core Cell Cycle Gene Families AT5G63610 56.757 5.67e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gma06g01405 Pkinase 9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01405 K02208 - gmx:100775334 265.003