Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01401 ATGAAGGGAGAATTAGAGTTGCCACCAGGGTTCAGATTTCACCCCACTGATGAAGAATTGGTGAATCACTACTTGTGTAGGAAGTGCGCGGGTCAACCAATCGCGGTTCCCATCATCAAAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATTGGCTACTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGATCGGAAATACCCGAACGGTTCACGGCCGAACCGTGCCGCCGGAAGCGGCTATTGGAAAGCCACCGGCGCCGATAAGGCGATCGGAAAACCGAAAGCGCTAGGGATCAAGAAAGCTCTGGTTTTTTACGCCGGAAAAGCCCCCAAAGGAGTGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCTGCCTCCAAGAAAAACAACAACAACTTGAGGCTTGATGATTGGGTGTTGTGTCGAATCTACAACAAGAAAGGGAAGATTGAGAAATACAACACGACCGCACCGAAGATGAATCTTGAAATGATTCATAGTTTTGAGCACGAGAACGAGACGAAGCCTGAGATTCATAAGCTTGGAAATGAGCAATTGTTGTACACGGAGACTTCAGATTCGGTGCCAAGGTTGCACACGGACTCGAGCAGCTCGGAGCACGTGGTTTCGCCCGATGTGAGGTGCGAGAGGGAAGTGCAGAGCGACCCCAAGTGGAATAACGATGATTATGATCTGGGCCTACAGCTAGAAAACGCGTTTGATTTTCAGTTTAATTACTTGGACGATAATAACCTTTCCGTCGACGATGACCCCTTTGGCACTGTTCAGTACCAAATGGGTCAGCTCTCGCCCTTGCAGGACATGTTCATGTACCTACAGAAGATGTGA 888 0.4854 MKGELELPPGFRFHPTDEELVNHYLCRKCAGQPIAVPIIKEVDLYKFDPWQLPEIGYYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNNNNLRLDDWVLCRIYNKKGKIEKYNTTAPKMNLEMIHSFEHENETKPEIHKLGNEQLLYTETSDSVPRLHTDSSSSEHVVSPDVRCEREVQSDPKWNNDDYDLGLQLENAFDFQFNYLDDNNLSVDDDPFGTVQYQMGQLSPLQDMFMYLQKM 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01401 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Gma06g01401 295 Gene3D NAC domain 16 164 IPR036093 GO:0003677|GO:0006355
Gma06g01401 295 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 272 - -
Gma06g01401 295 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Gma06g01401 295 PANTHER NAC TRANSCRIPTION FACTOR 56 5 272 - -
Gma06g01401 295 ProSiteProfiles NAC domain profile. 7 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01401 Gma-Chr6 13272049 13273437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01401 1 294 NAC Transcription Factor Family AT1G01720 62.252 7.50e-123 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma06g01401 NAM 6.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01401 - - gmx:100779770 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01401 06 13272049 13273437 Gma06g01401 06 13272049 13273437 ECH
Gma04g02377 04 54155385 54157419 Gma06g01401 06 13272049 13273437 GST