Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01366 ATGAATCTCTCTTATCTTACTCGCTTCCCCGAGCGTCTCGTTGCTCCTCTTTATGCCACACTTCCCACTACAGCTACTACTAGTGGAAATAGGCCTGAGAATTTTGCGATTGAAGGGCGTAATTTGAAATTCTCATTCACGACGAGGCAAACACAGGATGTACCGGTTCTTAAGGATTGTTCGATTCGCATTCCTTGCGGGCAGTTTTGGATGCTTCTTGGACCCAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACTCCAACTTCAGGAACAGTGTACGTGAATGGGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACGGTAGATTCTGATGTTGCATTTGGTCTTGGTAAGATCAATTTGGCTCACGATGAAGTCAGATCTAGGGTGTCAAGAGCTTTGCATGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTTGCTGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAGCTGACCAGGTTGGGGTCATCAAAGCTGTTAGGAACTCAGTGGATACCTCTGCAGAAGTTACAGCATTATGGGTCACCCATCGCTTGGAAGAACTGGAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTAGTCATGCATGGAGATGCCGCTAGCATTAGGAGTTTCATTGAAGCCAGGCAATCTGCCTATATAACCCAGATTAATTCTTAA 801 0.4557 MNLSYLTRFPERLVAPLYATLPTTATTSGNRPENFAIEGRNLKFSFTTRQTQDVPVLKDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVNGPKSFVFQNPDHQVVMPTVDSDVAFGLGKINLAHDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEADQVGVIKAVRNSVDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVMHGDAASIRSFIEARQSAYITQINS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01366 266 Pfam ABC transporter 57 189 IPR003439 GO:0005524
Gma06g01366 266 SMART AAA_5 66 239 IPR003593 -
Gma06g01366 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 262 IPR003439 GO:0005524
Gma06g01366 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 255 IPR027417 -
Gma06g01366 266 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524
Gma06g01366 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 26 265 - -
Gma06g01366 266 Gene3D - 33 265 IPR027417 -
Gma06g01366 266 CDD ABC_cobalt_CbiO_domain1 38 239 IPR015856 GO:0005524|GO:0016020|GO:0055085
Gma06g01366 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 26 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01366 Gma-Chr6 12855089 12858183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01366 37 244 Calmodulin-binding Proteins AT2G36910 29.646 1.32e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01366 - - gmx:100813654 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02053 04 50974764 50980254 Gma06g01366 06 12855089 12858183 GST