Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01363 ATGCCCACTTGGTGGGGTAAAAAGTCCAGCAAGAGCAAGGACCAACAACCGCAAGAAGACCACCACCACCCCCCTCATGGCGGAGGAGGAGGCGCCGCCACCAGTGTCCTTAACTTCAATTTCAACAAGCTCAACAAGCCCAGGCCCGACAGGCCCTCCAAGAGCTTCGACGACGTCGTCAGAAACTCCCCTCGCTGCAGCCGCGATTTCAGTTCCTCCGCCGCCGCCGCCGTCGACCAAGGCCTCCCCTTGCCTCGCCCCTCTGTCTCCTCCACGCAAAGCTTCGGCATCGAGCAAGGCCTTGTTTTCGGATCTGGCTCTGTTTCCGGCTCCAGCGTCAGCTCCAGCGGCTCCTACGATGATCACCCTACCTGTCACTCTCAGATTAATGCCTCCAGAGGGCAAGGTGACACGAAGTTCTATGCGAGGTCTAAAAGCCCGGGTCCTGGGTCAAGAGGGCCCACCAGCCCAACATCACCTCTTCATCCGAAGTTGCATGTTTTGAGTCTTGACTCCCCTACAGGCAGGCAAGAAGGTGAATGTCATCCATTGCCTCTTCCGCCAGGTTCTCCTACCAGTCCTTCTTCTTCTCTTCCCAGCACAAGAGCAAATGGAATGACGGAACACACTACCGGTAACCTTTCGAAGTGGAAGAAAGGAAAGCTTCTTGGTCGGGGAACATTTGGGCATGTTTACCTGGGATTCAATAGtgatagtggacaattgtgcgcaataaaagaagtcagggttgtctgtgatgaccaatcatcaaaagagtgcctcaaacaacttaatcagGAGATCCATTTGCTCAGTCAGCTTTCACATCCAAACATTGTTCAATACTATGGGAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATATGTCTCTGGTGGTTCTATTCATAAATTACTTCAGGAATATGGGGCCTTCAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTTCCTATCTTCATGGGAGAAATACAGTACATAGGGATAtcaaaggggctaacatactagttgatcctaatggtgaaatcaagctggcagactttggaatggctaaacatataaattcttcttcctccatgctttctttcaaagggagtccatactggatggcacccgaggttgtaatgaatacaaatggctatagtcttcctgttgatatatggagtttgggatgcacaattcttgaaatggcaacatcaaagcctccttggaatcagtatgaaggggtagctgcaatatttaaaattggtaacagcagagatatgcctgaaattccggatcacctctcaagtgaggcaaagaatttcattcagctatgcttacaaagagatccatcagcccgcccaacagcccagaagttaatagagcatccctttattcgagatcagtcagcaacaaaagctacaaatgtcagaataaccagggatgctttcccctacatgtttgatggaagtcggacgcctccgCCAGTTTTAGATCATTCCAATAGAACAAGTTTAACTTCATTCGATGGAGATTATGCAACAAAGCCAATTCCCGTAACTTCACGTACAGTAAGGAGCCCAAGAGATAACACAAGAATGATCACATCTTTACCAGTATCTCCCTGTTCAAGTCCTTTGCGACAGTATGGGCCAGCACACAAGAGCTGTTTCCTTTCTCCTCCTCACCCAACTTACACTTTGATGGGGCAAAATACCCTCCCCTCATATCCAGTGAGATCAAATGCCACATTCACTCTTGACCCTTTTCATGAAACTGCTTTCTACAAAGCCCACACACCCGGTGGATCCCCAAGAAGACTCATTTGA 1851 0.3452 MPTWWGKKSSKSKDQQPQEDHHHPPHGGGGGAATSVLNFNFNKLNKPRPDRPSKSFDDVVRNSPRCSRDFSSSAAAAVDQGLPLPRPSVSSTQSFGIEQGLVFGSGSVSGSSVSSSGSYDDHPTCHSQINASRGQGDTKFYARSKSPGPGSRGPTSPTSPLHPKLHVLSLDSPTGRQEGECHPLPLPPGSPTSPSSSLPSTRANGMTEHTTGNLSKWKKGKLLGRGTFGHVYLGFNSDSGQLCAIKEVRVVCDDQSSKECLKQLNQEIHLLSQLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSRDMPEIPDHLSSEAKNFIQLCLQRDPSARPTAQKLIEHPFIRDQSATKATNVRITRDAFPYMFDGSRTPPPVLDHSNRTSLTSFDGDYATKPIPVTSRTVRSPRDNTRMITSLPVSPCSSPLRQYGPAHKSCFLSPPHPTYTLMGQNTLPSYPVRSNATFTLDPFHETAFYKAHTPGGSPRRLI 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01363 616 Gene3D Transferase(Phosphotransferase) domain 1 214 493 - -
Gma06g01363 616 CDD STKc_MEKK1_plant 216 473 - -
Gma06g01363 616 ProSiteProfiles Protein kinase domain profile. 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01363 616 MobiDBLite consensus disorder prediction 1 213 - -
Gma06g01363 616 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Gma06g01363 616 PANTHER MAP KINASE KINASE KINASE 1 599 - -
Gma06g01363 616 SMART serkin_6 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01363 616 SUPERFAMILY Protein kinase-like (PK-like) 215 556 IPR011009 -
Gma06g01363 616 MobiDBLite consensus disorder prediction 85 139 - -
Gma06g01363 616 Pfam Protein kinase domain 218 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01363 616 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 599 - -
Gma06g01363 616 MobiDBLite consensus disorder prediction 195 213 - -
Gma06g01363 616 MobiDBLite consensus disorder prediction 12 26 - -
Gma06g01363 616 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01363 Gma-Chr6 12843551 12849512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01363 1 536 MAP Kinase Kinase Kinase AT1G53570 57.016 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma06g01363 Pkinase 4.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01363 K04421 - gmx:100813122 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02054 04 50982457 50988122 Gma06g01363 06 12843551 12849512 GST
Gma05g01887 05 40342159 40347940 Gma06g01363 06 12843551 12849512 PCT
Gma08g00148 08 1244233 1250252 Gma06g01363 06 12843551 12849512 PCT
Gma06g01363 06 12843551 12849512 Gma05g01887 05 40342159 40347940 PCT