Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01343 ATGAGTTTGATGGAAACAGAAAGCTCAGAAGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCTAACGTTCTTGAAATCGATCCTACTAATCGCTACATGAGGTATAACGAAGTTATTGGCCAAGGAGCTTTCAAGACTGTTTACAAGGCGTTTGATGAAATCATTGGACTTGAAGTTGCATGGAGCCAAGTTCAGATTGATGAGGTATTGCAGACACCAGGTGGCTTAGAGAGGCTTTACTCAGAAGTGCATCTATTGAAGTCACTAAAGCACGACAGCATAGTAACTTTCTACAATTCCTGGATTGATGACAAGCACAGAACTCTTAACTTGATTACCGAGTTGTTCACCTCAGGGAGCCTCAGAAAGTATAGTAAGAAACACAAGAAGGTTGACATAAAGGCCGTTAAAGGATGGGCAAAGCAGATTTTAATGGGTTTAAACTATCTCCACAGTCACAACCCACCTATTATACATAGGGACCTGAAGTGTGATAATATATTTATTAATGGTCACCGAGGAGAAGTTAAAATTGGCGATCTAGGGTTGGCAACTCTGTTGAAGCAGACTACTGCCAAGAGTGTAATTGTAGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGCCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGCTGCTCTTTCCAAACTCAAGGATCCAGAAGTAAAATCATTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGAAGGACAATTTTCTCCAAGTGAATGGTTCATTGAAGAATCGTCGACTTCCATTGCCAGATATTGTTCTCCCTAAATATGGAACCTTCGAAAATCGTTGTCTTATGTCAGAAGGCCCAGCTAGTACACGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTTCCATTGACCACTTTACTTTATAATTCTGTTGATTCTATTGACAATGCATTGCCTTCCCCATGTGTTGAGATACGAAGGTTGAAGGAAGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATGAAAAGTCTGTATCATTAGTTCTCCGCATAGCTGATCAGAATGGGCGGGCAAGAAATATCCATTTCATATTCTACATCAACAGTGATACTGCCATCTCAGTTTCAAGTGAAATGGTTGAACAACTTGAACTTGCTGAGCAGAATGTTAAATTTATAGCAGAGTTAATTGATTTGCTATTGACAACTTTGCTTCCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTTCTTCTAATGGTAAACTAACTCATTCAAGTAAACAGAAAGACTCAGAATTAGCAAAATACAGGCAAAGCTCAGAAGATTCTAGCCAAATTGTGGCTGAAATTGTAGGTCTCTCAACCTCGCCTGGAAGACCGGCAGAAGTGGAAAACATTGATAATGTGATTTGCGACAAGTTTGTGTCTCATGCAAACATTGGTCTTCGAAGAGAATTAAAGACAGATGATTTGTATTTTGAGAAACATAGGTCATACGCTTCTGCAACATCTGACTTCAATGATAAGCATTTTTCTACAGTTTCGTTCATGTCTGCTAAATCAGGATTTACAGACTTTGACCTTCCCAAAGTTAATAGTCAATGCTCGCTTGCATCTGAATTCGGGGCAACATTTGATTATAGCAGTTTTCCTTGTGTGGAAAGCAATGGTACGATGAAATTCTCTAGTCATCCCATTAATGCTTCCTGCTTCTTTCAACCTGGGGATGAGTTGAGAATAGAGTTAGAGAGGATTGAGCAACAATATCAGGATGAAATGGAAGATTTATTGAAAAGAAAAAACCATGACATCATGGAGACTAGAAGGAGGCATTCTTAA 1974 0.3926 MSLMETESSEEGAGLLEPPDPNVLEIDPTNRYMRYNEVIGQGAFKTVYKAFDEIIGLEVAWSQVQIDEVLQTPGGLERLYSEVHLLKSLKHDSIVTFYNSWIDDKHRTLNLITELFTSGSLRKYSKKHKKVDIKAVKGWAKQILMGLNYLHSHNPPIIHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTTAKSVIVGTPEFMAPELYDEHYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPAALSKLKDPEVKSFIEKCLVPASQRLSAKELLKDNFLQVNGSLKNRRLPLPDIVLPKYGTFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVDSIDNALPSPCVEIRRLKEGDIFFLKGEQNDEKSVSLVLRIADQNGRARNIHFIFYINSDTAISVSSEMVEQLELAEQNVKFIAELIDLLLTTLLPDWKPCVAIDHLVSSNGKLTHSSKQKDSELAKYRQSSEDSSQIVAEIVGLSTSPGRPAEVENIDNVICDKFVSHANIGLRRELKTDDLYFEKHRSYASATSDFNDKHFSTVSFMSAKSGFTDFDLPKVNSQCSLASEFGATFDYSSFPCVESNGTMKFSSHPINASCFFQPGDELRIELERIEQQYQDEMEDLLKRKNHDIMETRRRHS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01343 657 Gene3D - 386 485 - -
Gma06g01343 657 Pfam Protein kinase domain 36 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01343 657 ProSiteProfiles Protein kinase domain profile. 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01343 657 SMART serkin_6 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01343 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 657 - -
Gma06g01343 657 SUPERFAMILY Protein kinase-like (PK-like) 35 342 IPR011009 -
Gma06g01343 657 CDD STKc_WNK 31 291 - -
Gma06g01343 657 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Gma06g01343 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Gma06g01343 657 MobiDBLite consensus disorder prediction 1 23 - -
Gma06g01343 657 Gene3D Transferase(Phosphotransferase) domain 1 116 298 - -
Gma06g01343 657 Coils Coil 620 644 - -
Gma06g01343 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01343 Gma-Chr6 12627374 12630290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01343 133 461 MAP Kinase Kinase Kinase AT1G49160 69.301 4.70e-165 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma06g01343 Pkinase 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01343 K08867 - gmx:121175054 1283.86