Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01340 ATGGAATGTGAAGGCAAATTGGCGAGGAGGGTGGTGGGAGTGAGAAATCATTGTTACCTTTTGAAATCCAAAATCGGAGAGGGTTCATTCTCCGCCGTGTGGAGAGCGGAGCAGAGACCACCAACCGGCGATGACGTGGCGGTGAAGCAGGTCTTCCTCTCCAAACTCAACCCTCGCCTCAAGGCATGTTTGGATTGCGAGATCAATTTCTTGTCCTCTGTTAACCACCCCAATACTATTCGCCTTCTTCACTTCTTCCAGTATGATGGATGTGTATACCTGGTCCTTGAGTTTTGTGCTGGAGGAAATCTAGCTTCTTATATTCAAAATCATGGGAGAGTTCACCAACAAATAGCCAGAAAATTCATGCAGCAGCTTGTTGCTAACATGTATTTTTCTGTTGAGCAGGCCCTTTATTTTTGTTATTCTGCCAGTACTCCTGTAGCAACAAAGCAAAATGCAAACTTAGTTGTAGTTCAGAACTTAAGACTACCTTGCCTCTTAAATCTTAGAAAAATGCTAAACGCTAGGAATAACATTTTGCTATCAAGTCACGGGGTTGATGCAGTACTAAAGCTCGCTGATTTTGGTCTCTCAAGGACTATATGTCCCGGTGAATATGCCGGGACAGTCTGTGGTTCTCCATTATGCATGGCTCCAGAAGCTCTTAAGTTCCAGAGATATGATGACAAGGCAGATATGTGGAGTGTTGGAACCATTCTTTTTGAGCTTCTAAACGGCTACCCACCTTTTAATGGTAGAAATAATGTTCAGGTGTTGAGAAACATCAGATCTTGCACCTGTCTTCCATTTTCTCAACTGATTCTTTCAGGATTGGATCCCGACTGTCTTGACATTTGTTCTAGGCTACTATGCTTAAATCCAGCTACTTGA 894 0.4329 MECEGKLARRVVGVRNHCYLLKSKIGEGSFSAVWRAEQRPPTGDDVAVKQVFLSKLNPRLKACLDCEINFLSSVNHPNTIRLLHFFQYDGCVYLVLEFCAGGNLASYIQNHGRVHQQIARKFMQQLVANMYFSVEQALYFCYSASTPVATKQNANLVVVQNLRLPCLLNLRKMLNARNNILLSSHGVDAVLKLADFGLSRTICPGEYAGTVCGSPLCMAPEALKFQRYDDKADMWSVGTILFELLNGYPPFNGRNNVQVLRNIRSCTCLPFSQLILSGLDPDCLDICSRLLCLNPAT 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01340 297 Pfam Protein kinase domain 178 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01340 297 Pfam Protein kinase domain 21 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01340 297 SUPERFAMILY Protein kinase-like (PK-like) 17 296 IPR011009 -
Gma06g01340 297 PIRSF ILK 168 270 - -
Gma06g01340 297 PIRSF ILK 6 137 - -
Gma06g01340 297 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 19 296 IPR045269 GO:0004674|GO:0006914
Gma06g01340 297 ProSiteProfiles Protein kinase domain profile. 19 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01340 297 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 19 296 - -
Gma06g01340 297 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Gma06g01340 297 Gene3D Transferase(Phosphotransferase) domain 1 14 142 - -
Gma06g01340 297 Gene3D Transferase(Phosphotransferase) domain 1 176 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01340 Gma-Chr6 12615283 12619252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01340 19 297 CBL-interacting serine-threonine protein kinases AT2G30360 30.070 3.23e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gma06g01340 Pkinase 2.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01340 - - gmx:100787409 454.136