Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01339 ATGTATTCTGTTGCTTCCACTTCCCTTACTTCACCACTCCTCCACGACCTTGAGAACTTCCATTACTCAAGAAGGTTACTCCTTCACTCCCCATACCTTAACCAATCAGCCAAACCCCCAAGAAGCAGCCACGATTCTTCAACAGAAACATACCTTGGAGATGGCAATTTCGATGCAAATGTTGTCATGGTACTCTCAATCCTACTCTGTGCTCTCATATGCTCACTGGGGCTAAACTCCATCATAAGGTGTGCACTAAGGTGTTCAAATTTTGTTGTGAGTGACTCAGTGGCAACCAATAACAATAACAACAACCCTCCAGCAGCAAGAGTTGCCAACACAGGAGTGAAGAAGAAAGCACTCAAGACTTTCACCACAagttcacaagtggtgaaaagACAGTGCCTAATTGAGACTTGCCAGAAGATTGTTGGGTGCAGTACTCAACAAGCTAGCTCATCGCAACAACATGTGTTGGCAGTGCCAGAAACCATTGTGACCATAATAGCCCCACTTGAGCCAGAAGattatatagaagatcgagagaataatacttga 558 0.4122 MYSVASTSLTSPLLHDLENFHYSRRLLLHSPYLNQSAKPPRSSHDSSTETYLGDGNFDANVVMVLSILLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGVKKKALKTFTTSSQVVKRQCLIETCQKIVGCSTQQASSSQQHVLAVPETIVTIIAPLEPEDYIEDRENNT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01339 185 PANTHER RING-H2 FINGER PROTEIN ATL78 133 182 IPR044602 GO:0016567|GO:0016740
Gma06g01339 185 PANTHER RING-H2 FINGER PROTEIN ATL78 6 126 IPR044602 GO:0016567|GO:0016740
Gma06g01339 185 PANTHER RING-H2 FINGER PROTEIN ATL78 133 182 - -
Gma06g01339 185 PANTHER RING-H2 FINGER PROTEIN ATL78 6 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01339 Gma-Chr6 12607391 12608662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01339 25 122 C3H Transcription Factor Family AT3G10910 43.434 1.70e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01339 K19040 - gmx:100807227 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02075 04 51226198 51227269 Gma06g01339 06 12607391 12608662 GST
Gma05g01861 05 40064259 40065155 Gma06g01339 06 12607391 12608662 PCT
Gma06g01339 06 12607391 12608662 Gma05g01861 05 40064259 40065155 PCT