Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01334 ATGAAAGGAAACAACCCCTATTTGGTTGTGATTCTCATACAAACCATATATGCTGCTATGATTCTTCTCTCAAAAGTGGCATTCGATCATGGCATGGACAGTTTTATCTTCGTCTTCTATAGACAGGCAGCAGCAACCCTCTTTTTGACCCCTTTCACTTTCTTCTTCGAATGGAAAACTGCACCACCTATGCCTTTTTGGACCTTCTGCAAGATTTTTTTCATTTCTTTATTTGGGATTACTTTAACCTTGGAAATATATGGTATCGCCCTTATTTACACTTCAGTAACTTTGGCTGCTGCTACTTCAAACTCTCTTCCAGCAATCACCTTCTTCTTGGCACTCCTactaagGATTGAGAGTTTGAAAATAAAGACGACCCCTGGGATTGTTAAGTTGATAGGCATTGTGGCATGCTTGGCTGGTGCAGCAACCCTTGCCTTTTATAAAGGTCCTCCTTTGAAATTTTTAAGCCATTATCACCTTTTGGATTACCATAAAACCCTACAACATCAAGGTCGTGCTCCATCCGGTGCGTGGATAAAGGGTTGCTTCCTCATGATCCTCTCCAACACGTGTTTCGGGCTATGGTTTGTACTACAGGCTTTTATTATAAAAGTATACCCTTCAAAGCTGCTCTTCACAACTATTCAGTGTTTCTTAAGCTCAATTCAGTCTTTGGTCATTGCCTTGGCAGTAGAAAGGGACATTGAGCAATGGAAGTTAGGTTGGAATGCCAGGCTCCTCGCCGTATTATATTGTGGAATTATGGTCACGGGCGTAACATACTACTTACAAACATGGGTTATAGAGAAGAAAGGACCCGTGTTTCTAGCCATGTCAACTCCACTGGTTCTTATTATTACAACCTTCGCTTCTGCAACCATCTTGGGTGAGATTATCAGTTTGGGAAGTCTTCTCGGAGGATTCATATTGATTCTAGGATTGTACAGCGTATTGTGGGGAAAGAGCAAAGAGCATCACATGCCAAAAGTCTCACTAGACGTGGAGCAAACATCGAGTAATTAA 1029 0.414 MKGNNPYLVVILIQTIYAAMILLSKVAFDHGMDSFIFVFYRQAAATLFLTPFTFFFEWKTAPPMPFWTFCKIFFISLFGITLTLEIYGIALIYTSVTLAAATSNSLPAITFFLALLLRIESLKIKTTPGIVKLIGIVACLAGAATLAFYKGPPLKFLSHYHLLDYHKTLQHQGRAPSGAWIKGCFLMILSNTCFGLWFVLQAFIIKVYPSKLLFTTIQCFLSSIQSLVIALAVERDIEQWKLGWNARLLAVLYCGIMVTGVTYYLQTWVIEKKGPVFLAMSTPLVLIITTFASATILGEIISLGSLLGGFILILGLYSVLWGKSKEHHMPKVSLDVEQTSSN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01334 342 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Gma06g01334 342 Pfam EamA-like transporter family 6 144 IPR000620 GO:0016020|GO:0016021
Gma06g01334 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Gma06g01334 342 PANTHER WAT1-RELATED PROTEIN 7 329 IPR030184 GO:0016021|GO:0022857
Gma06g01334 342 PANTHER WAT1-RELATED PROTEIN 7 329 - -
Gma06g01334 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01334 Gma-Chr6 12545932 12548252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01334 1 254 Nodulin-like Gene Family AT5G64700 58.140 2.47e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01334 - - gmx:100798379 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01851 05 40009416 40013808 Gma06g01334 06 12545932 12548252 PCT
Gma08g01343 08 11370737 11375557 Gma06g01334 06 12545932 12548252 PCT
Gma06g01334 06 12545932 12548252 Gma05g01851 05 40009416 40013808 PCT
Gma06g01334 06 12545932 12548252 Gma08g01343 08 11370737 11375557 PCT