Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma06g01323 | ATGAACAACCCTACATTGTCAAGGCTATTTCCGGGTTTGAATAGGGAGAGGGAGATGTCTGCTATGGTCTCAGCTTTGACCCACGTGGTCTCCGGAGAGGTGCCAATAACCGGTGATTCTTCTTCTTCTTCTTCTTTGGTTCTTCATCATCAACCTCATGATGATACTGTTATTGTTACACCAACCATGCCTTCTTCTTCTTCTTCATCTACTTATGTTGTTGGCACCTCTTCTCTCAAGAGAAGTAGGGAAAATGATACATATACATCATCCTTATTCTCACATCCACCTTCATCATCCCCTGCTATGCCAACAAGGGCAGAATATGCAACAAGGGAAATGGGAAATTCTGTGTACGAATACAGAACAACAACAGAGAATGCAACAAGGGATGAAGGAAGGAGAAAATACAGAGGGGTGAGGCAGAGGCCGTGGGGGAAATGGGCAGCAGAGATAAGAGACCCATTCAAAGCGGCAAGAGTATGGTTAGGAACATTTGACACAGCAGAGGCAGCAGCTAGAGCATACGATGAAGCTGCTCTTCGTTTCAGAGGCAACAAAGCCAAACTCAATTTTCCTGAGAATGTCACTCTCCGACAACCTCAATTCACTGTTTCCAATTCTCCATCTTCTCTTGTATCTATTACAACATCAACAGACCCAGTTGTTCACAGTACTCGACCTCTTCTTCTTCCTTCTCAGGCTTCAACTGCGACCAATGTTTACGAGTATTTTCAACTCTCGGGCTTCCCCACCAACACCAACCTTTATGATGGTAATAGGATGTTTGTGACGTCTAATGCCATGGCTTCTCATCATCTTCAATCTTCGTCTTCGTTGTTGTCGTCTTCTTCTTCTGCGTTTGTTTCTTCTGTAACTTCTCAGGACACTTCACTTTCTTCGTTGTATTCTGGCCAGTTGCCACCATGGTCAAAGGTTTCTGGTCACAGCTCGTCTTCCTCCGGATGA | 969 | 0.4469 | MNNPTLSRLFPGLNREREMSAMVSALTHVVSGEVPITGDSSSSSSLVLHHQPHDDTVIVTPTMPSSSSSSTYVVGTSSLKRSRENDTYTSSLFSHPPSSSPAMPTRAEYATREMGNSVYEYRTTTENATRDEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPQFTVSNSPSSLVSITTSTDPVVHSTRPLLLPSQASTATNVYEYFQLSGFPTNTNLYDGNRMFVTSNAMASHHLQSSSSLLSSSSSAFVSSVTSQDTSLSSLYSGQLPPWSKVSGHSSSSSG | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma06g01323 | 322 | CDD | AP2 | 136 | 195 | IPR001471 | GO:0003700|GO:0006355 | |
Gma06g01323 | 322 | Gene3D | AP2/ERF domain | 135 | 195 | IPR036955 | GO:0003700|GO:0006355 | |
Gma06g01323 | 322 | SUPERFAMILY | DNA-binding domain | 136 | 194 | IPR016177 | GO:0003677 | |
Gma06g01323 | 322 | MobiDBLite | consensus disorder prediction | 60 | 104 | - | - | |
Gma06g01323 | 322 | Pfam | AP2 domain | 136 | 185 | IPR001471 | GO:0003700|GO:0006355 | |
Gma06g01323 | 322 | PANTHER | DNA-BINDING DOMAIN | 14 | 313 | IPR044808 | GO:0003700|GO:0009873 | |
Gma06g01323 | 322 | MobiDBLite | consensus disorder prediction | 299 | 322 | - | - | |
Gma06g01323 | 322 | ProSiteProfiles | AP2/ERF domain profile. | 136 | 193 | IPR001471 | GO:0003700|GO:0006355 | |
Gma06g01323 | 322 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 | 14 | 313 | - | - | |
Gma06g01323 | 322 | PRINTS | Ethylene responsive element binding protein signature | 137 | 148 | IPR001471 | GO:0003700|GO:0006355 | |
Gma06g01323 | 322 | PRINTS | Ethylene responsive element binding protein signature | 159 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Gma06g01323 | 322 | SMART | rav1_2 | 136 | 199 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma06g01323 | Gma-Chr6 | 12442874 | 12444733 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma06g01323 | 130 | 198 | AP2-EREBP Transcription Factor Family | AT5G61890 | 79.167 | 1.07e-34 | 125 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Gma06g01323 | AP2 | 3.7e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma06g01323 | - | - | gmx:100796247 | 562.762 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma04g02088 | 04 | 51361762 | 51363319 | Gma06g01323 | 06 | 12442874 | 12444733 | GST |