Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01317 ATGAAAGCTCTGTACAGAAGCTCTCTCTTGCTCCTCTTCTTCCTCTCCGTCTGTTCTGCATCTTCTTCTTCGGTTCCCACTCTGCAACTCCTAAGCTTCAAAAACTCTCTCCCGAACCCAACCCTGCTCCCGAACTGGCTCCCGAACCAAAGCCCATGCTCATTCACCGGCATCACCTGCAACGACACCCAGCACCTCACTTCCATAGACCTCTCCGGCGTCCCTCTCACCACAAACCTCACCGTCATCGCCACCTTCCTCCTCACCCTCGACAACCTCCAGTCACTCTCCTTAAAATCCACCAACCTCTCCGGCCCCGCCGCCATGCCTCCTCCTCTCTCCCACTCCAAGTGCGCCTCCACATTAACCTCCCTAGATCTATCACAAAACGCCCTCTCCGGTTCCCTCAACGACATGTCGTTTCTCTCCTCCTGCTCCAACCTCCAATCCCTCAATCTCTCCAGCAACCTTCTTGAATTCGACTCCTCTCACTGGAAGCTCCACCTCCTCGTCGCCGACTTTTCCTACAACAAGATTTCCGGCCCCGGTATCCTCCCCTGGCTTCTCAACCCTGAAATCGAACACCTCGCTCTGAAAGGCAACAAAGTCACCGGCGAAACCGACTTCTCCGGTTCCAATTCTCTCCAGTTTTTAGACCTTTCTTCCAACAACTTTTCTGTTACGCTTCCTACTTTCGGCGAGTGTTCTTCGCTTGAGTATTTGGACCTCTCCGCCAACAAGTACTTCGGCGACATTGCTCGCACTCTCTCGCCTTGCAAGAACCTCGTTTACTTAAACTTCTCCAGCAACCAGTTCTCCGGTCCGGTTCCTTCCCTTCCCTCCGGTTCGCTACAGTTCGTGTACCTTGCTTCAAACCACTTCCACGGCCAGATTCCTCTCCCCCTCGCCGACCTCTGCTCCACTCTCCTCCAGCTCGATCTCTCCTCCAACAACCTCTCAGGCGCTCTCCCCGAAGCCTTCGGCGCTTGCACTTCTCTTCAGTCCTTCGACATCTCCAGCAACCTCTTCGCCGGTGCGCTGCCTATGGACGTTCTCACGCAAATGAAAAGCCTCAAAGAGCTCGCGGTGGCGTTCAACGCGTTCCTCGGTCCCCTTCCGGAGTCTCTGACGAAGCTCTCCACTTTAGAGTCGCTGGATCTTAGCTCCAACAACTTCAGCGGCTCAATCCCGACAACGCTGTGCGGTGGTGACGCTGGGAATAATAATATTCTGAAGGAACTTTACCTGCAGAACAACCGGTTCACGGGTTTTATTCCACCCACGCTCAGCAACTGTTCAAACCTCGTTGCTTTGGACTTGAGTTTCAACTTCCTCACGGGAACTATTCCTCCAAGCCTAGGGTCTCTTTCCAAGCTTAAAGACTTGATCATCTGGCTCAACCAGCTCCATGGAGAAATACCGCAGGAGCTCATGTATCTGAAAAGCCTCGAGAATTTGATCCTGGATTTCAACGACTTGACTGGGAACATTCCCTCTGGGCTTGTTAACTGCACCAAGCTGAACTGGATCTCCCTCTCCAACAACAGGCTCAGCGGCGAGATTCCGCGGTGGATTGGGAAGCTTTCTAATCTCGCCATACTTAAGCTCAGTAATAACTCTTTCTCCGGCCGGATTCCGCCGGAGCTCGGCGATTGTACTAGTTTAATATGGTTGGATCTGAATACTAATATGCTCACCGGGCCCATTCCGCCGGAGCTGTTCAAGCAGTCGGGGAAGATCGCGGTGAATTTCATCAGTGGGAAGACGTATGTGTATATAAAGAACGATGGGAGCAAAGAGTGTCATGGTGCGGGGAACTTGCTGGAGTTTGCCGGGATCAGTCAGCAGCAGTTGAACAGGATTTCGACGAGGAACCCGTGCAATTTCACTAGGGTTTATGGAGGTAAGTTGCAGCCAACGTTTAACCATAATGGTTCTATGATATTTTTGGATATCTCGCACAACATGTTGTCAGGGAGTATTCCCAAGGAGATTGGGGCCATGTACTATTTGTACATTCTCAATTTGGGTCATAATAATGTGTCTGGGAGCATTCCTCAAGAGCTTGGGAAGATGAAGAATCTCAACATCCTTGATCTCTCAAGTAATAGACTGGAGGGGCAAATTCCTCAGAGTCTCACGGGGCTTTCCTTGCTCACTGAGATTGACCTGTCGAATAACTTGCTTACGGGGACGATTCCTGAGTCGGGTCAATTTGATACTTTCCCTGCGGCGAGATTTCAGAACAACTCTGGTCTCTGTGGAGTTCCTCTCGGCCCATGTGGTTCGGACCCGGCGAATAACGGGAATGCGCAACATATGAAGTCTCACAGGAGGCAGGCTTCTCTGGTGGGGAGTGTGGCCATGGGTTTGTTGTTTTCCCTCTTCTGCGTCTTTGGTTTGATCATTATTGCCATTGAGACCAGGAAGAGGAGGAAGAAGAAGGAGGCTGCTCTTGAAGCCTATGCTGATGGTAATTTGCATTCGGGTCCTGCCAACGTGAGCTGGAAGCACACCAGTACCCGGGAAGCGCTTAGCATAAACCTTGCAACGTTTAAGAGGCCGCTCAGGAGGCTTACTTTTGCGGACCTTCTTGACGCTACCAATGGCTTTCACAATGATAGTCTCATTGGCTCTGGTGGGTTTGGGGATGTTTACAAGGCTCAGTTGAAGGATGGAAGTGTTGTGGCTATCAAGAAGCTGATTCATGTCAGCGGCCAAGGGGACagggaattcactgctgaaatggagaccattgggaagatcaagcacaggaaccttgttcctctgttgggatactgcaaggttggggaagagaggctcttggtttatgattatggtgtgGTTTTGTTGGAGCTACTAACTGGGAAAAGGCCAACAGATTCGGCTGATTTTGGTGATAATAATCTTGTTGGATGGGTTAAACAACATGCCAAGCTGAAAATAAGTGATATTTTTGACCCAGAGCTCATGAAGGAAGACCCCAATTTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCAGTTTCCTGTTTGGATGATCGGCATTGGAGACGTCCAACGATGATTCAAGTGTTGACAATGTTCAAGGAGATTCAGGCAGGATCTGGGATTGATTCTCAGTCAACCATAGCCAATGAAGATGACAGTTTCAATGCAGTTGAAATGGTGGAGATGAGCATTAAAGAAACCCCTGAATTGAGCAAGCATTAG 3213 0.4855 MKALYRSSLLLLFFLSVCSASSSSVPTLQLLSFKNSLPNPTLLPNWLPNQSPCSFTGITCNDTQHLTSIDLSGVPLTTNLTVIATFLLTLDNLQSLSLKSTNLSGPAAMPPPLSHSKCASTLTSLDLSQNALSGSLNDMSFLSSCSNLQSLNLSSNLLEFDSSHWKLHLLVADFSYNKISGPGILPWLLNPEIEHLALKGNKVTGETDFSGSNSLQFLDLSSNNFSVTLPTFGECSSLEYLDLSANKYFGDIARTLSPCKNLVYLNFSSNQFSGPVPSLPSGSLQFVYLASNHFHGQIPLPLADLCSTLLQLDLSSNNLSGALPEAFGACTSLQSFDISSNLFAGALPMDVLTQMKSLKELAVAFNAFLGPLPESLTKLSTLESLDLSSNNFSGSIPTTLCGGDAGNNNILKELYLQNNRFTGFIPPTLSNCSNLVALDLSFNFLTGTIPPSLGSLSKLKDLIIWLNQLHGEIPQELMYLKSLENLILDFNDLTGNIPSGLVNCTKLNWISLSNNRLSGEIPRWIGKLSNLAILKLSNNSFSGRIPPELGDCTSLIWLDLNTNMLTGPIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTRNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEIGAMYYLYILNLGHNNVSGSIPQELGKMKNLNILDLSSNRLEGQIPQSLTGLSLLTEIDLSNNLLTGTIPESGQFDTFPAARFQNNSGLCGVPLGPCGSDPANNGNAQHMKSHRRQASLVGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAALEAYADGNLHSGPANVSWKHTSTREALSINLATFKRPLRRLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYDYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDPELMKEDPNLEMELLQHLKIAVSCLDDRHWRRPTMIQVLTMFKEIQAGSGIDSQSTIANEDDSFNAVEMVEMSIKETPELSKH 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01317 1070 Pfam Leucine Rich Repeat 434 456 IPR001611 GO:0005515
Gma06g01317 1070 Pfam Leucine Rich Repeat 411 432 IPR001611 GO:0005515
Gma06g01317 1070 SUPERFAMILY L domain-like 639 759 - -
Gma06g01317 1070 Pfam Protein kinase domain 871 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01317 1070 Gene3D Phosphorylase Kinase; domain 1 832 942 - -
Gma06g01317 1070 SUPERFAMILY Protein kinase-like (PK-like) 842 1028 IPR011009 -
Gma06g01317 1070 Pfam Leucine rich repeat N-terminal domain 29 61 IPR013210 -
Gma06g01317 1070 Pfam Brassinosteroid receptor island domain 578 642 IPR045381 -
Gma06g01317 1070 SUPERFAMILY RNI-like 27 341 - -
Gma06g01317 1070 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 943 1044 - -
Gma06g01317 1070 PANTHER SYSTEMIN RECEPTOR SR160 14 946 - -
Gma06g01317 1070 ProSitePatterns Protein kinases ATP-binding region signature. 877 900 IPR017441 GO:0005524
Gma06g01317 1070 Gene3D - 583 643 - -
Gma06g01317 1070 Pfam Leucine rich repeat 506 565 IPR001611 GO:0005515
Gma06g01317 1070 Pfam Leucine rich repeat 671 729 IPR001611 GO:0005515
Gma06g01317 1070 ProSiteProfiles Protein kinase domain profile. 871 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01317 1070 SUPERFAMILY RNI-like 257 571 - -
Gma06g01317 1070 Gene3D Ribonuclease Inhibitor 30 761 IPR032675 -
Gma06g01317 1070 SMART LRR_typ_2 692 715 IPR003591 -
Gma06g01317 1070 SMART LRR_typ_2 480 504 IPR003591 -
Gma06g01317 1070 SMART LRR_typ_2 305 329 IPR003591 -
Gma06g01317 1070 SMART LRR_typ_2 716 741 IPR003591 -
Gma06g01317 1070 SMART LRR_typ_2 379 403 IPR003591 -
Gma06g01317 1070 SMART LRR_typ_2 528 552 IPR003591 -
Gma06g01317 1070 PRINTS Leucine-rich repeat signature 692 705 - -
Gma06g01317 1070 PRINTS Leucine-rich repeat signature 122 135 - -
Gma06g01317 1070 PANTHER SYSTEMIN RECEPTOR SR160 943 1044 - -
Gma06g01317 1070 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 946 - -
Gma06g01317 1070 Gene3D Transferase(Phosphotransferase) domain 1 943 1034 - -
Gma06g01317 1070 Pfam Leucine Rich repeat 379 394 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01317 Gma-Chr6 12374263 12377954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01317 29 946 Receptor kinase-like Gene Family AT4G39400 63.987 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gma06g01317 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01317 K13415 - gmx:100799772 1765.36