Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01316 ATGATGTCAACAACTAATGTTAACCATAGCTTGTTTGAAGAACAAGATCAGATCCCTACGCAGATGGGGCTGTTCAATATTATTCCTTTCCCACCAAACCAAACCTACCCACCTTTGGGTTGTCAAACAGTAACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTGCAAATTTTTCTGAAACCCTACTTTCAACCGCTGTTAATCAAAGACCACGAGAAGAAGATCTCACTTCAAGTTTGGTAGGAGGAGGTGGAGGCCAACTCCTTTCCTTGAGCAGATCGAGAGTGAATTCATGGGCATGGGAGGAAGTAAGCGATTGCTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTAAAGAAACGCGTGGAGCGCTTGGCAGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACACGTGCACTCGCCATCAAATGAACTTGAAGACTCGCAAACCCCTTCTGAACTTAGTAATTTCCTGTGGTAG 711 0.4444 MMSTTNVNHSLFEEQDQIPTQMGLFNIIPFPPNQTYPPLGCQTVTLKSISAIAPSLSSAANFSETLLSTAVNQRPREEDLTSSLVGGGGGQLLSLSRSRVNSWAWEEVSDCLMGKRIGGDDNHHHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQTPSELSNFLW 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01316 236 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 227 IPR044810 GO:0003700
Gma06g01316 236 MobiDBLite consensus disorder prediction 221 236 - -
Gma06g01316 236 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01316 236 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01316 236 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01316 236 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 71 227 - -
Gma06g01316 236 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01316 236 SUPERFAMILY WRKY DNA-binding domain 151 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01316 236 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01316 Gma-Chr6 12354092 12357491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01316 49 236 WRKY Transcription Factor Family AT4G39410 50.213 6.38e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g01316 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01316 - - gmx:100799241 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02098 04 51467901 51470693 Gma06g01316 06 12354092 12357491 GST