Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01247 ATGGAGATTCTGAAAGCTGCAATTCCAGAAAACCTGAAGCGAGCGATAGCGGATAGCGATGTGGATGACCTTGGCAGCACATGCTCTTCTCTTCACCGCTTCTTTCTTCACTTCCACCCATTTCACCAGATGATCACTGAACTGGCTGATCCAAAGTACGCTCTGTCCGGTAAGAATAAGGACGCTGCGTTGAAATCCAAGCAGCTTGGCAATCAGTGCTTCTCCAACGCAGATTATGCTAAGGCCTTGGACTGCTACACTCAGGCATTGCGTGAGGCTCCATTAGACACTGGTGATATGGAGAGTAATCTTGTTGCAACATTGTATATCAATCGTGCTACTGTATTGCATAAAATGAGTCTTTTAGTTGAATGCTTACGGGATTGCACTCGAGCTCTTCAAGTTTGTCCTAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCAAATGCTTCGTTGGGAAATTATAAAAATGCAATCTGCGATCTAAATGTGGCCAAGAGTGTGGAACCTTCAATGGGTGGGAGGAGACAAATAGAAGGTGAACTTAAAATTCTTTTAGACCAATGCAGAAGCACAACTGCAGTAGTACAAATACAACATAAGGAGAACAACTGCAATACTGTGGGTGAGATGCCTCACATAAAGCTACAGTGTGTCTCCACACCTGATAAGGGAAGAGGCATGGTGTCATCATGTGTCATTTCACCAGGTTCTTTGGTTCATGTTGAAGAACCTTATGCTATGATAATATTAAAGCAATGTCGGGAAACGCATTGCCATTATTGCTTGAATGACCTACCTGCTGATAGAGTTCCTTGTATATCATGTTCAATACCATTGTATTGCTCCCACCAATGCCAGACACGGGCAACTGGGCAAATGTTCAAGATTTACCCAGACTATAATGGCTTTTTTAAAAACTTGCCCAGTGATCTTGGAGAATATGCTGCTGAAGTTATTCAATGCAATGATTCTGAACAGGAAATTGGGGATATAACTGAACATAAACATGAATGTCAAGGTGTACATTGGCCTGTGGTACTGCCGTCTGAGATAGTTTTGGCTGGTCGAATACTTGCTAGGTTTTTGCTAAATAGCTCACCTGAAGATATTATAAACTTTGTGGAAAGACTGGAGCTTTCTCATTGTTACAAACAATTGCCATCTGAAAGCAAATTGGATTCACATATATATGCCATTGTATTATTATATTGTCTTCAACATTCTTGTGGAACTATGTTTTCCATAGATGAAGTCTCCATATCTCAGGTTGTTGTCATAATTATTTCTCAAATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAATAGACGCCCATGGATCAGGTCATTTTGGAGATTTTCCATTTCAATCTGGTGCTCATTCAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGCAGTTTATTCAACCATTCTTGCCAGCCAAATGTTCATGCATATTTTCTTTCACGCGCTCTTTATTTACGAACCACAAATGTTGTAGCAGCTGGGAGTCAGCTAGAATTGTCTTATGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGGCTTAATTTTCTCAAAAACGAGTATGCGTTTCATTGTCTGTGTACTGGTTGTTCAGAAGTTAATCGATCTGACCTTGTCCTCAATGCCTTCCATTGTGTCAATCCAAATTGTTCTGGTGCAGTGTTAGAAAGCAGAGTACTTGATTGTGAGATGCAGAAAATCAAGCACTTCCCTATTCCTGACCATGTTGACAAGAATGATGACATTTATGAAGTATGTCATCATGTCTTCAAACAAAATGGTAAATCTATTCATATTCAACCTGGATACTGTTTGAAATGTGGTTCTTACTGTGATTTGGAGTCTTCGCATGCTGCAGTCGGTAAAGCTTTAGCATGCATAACAAGGTTGCAGGATGCAATATTGTCACAACAAATTTCAAGTATTACCATCTCTGATGCGTTGAGATCTCTAAAATTGCTAAGATTAAATTTGCATGCATACAACAAGCTCACTGCAGAGGCAGAAGACAGCATTGCCCAGGCTTTTTGTTTAGTGGGAGAATTACAATTATCTTTGGATCATTGTAAAGCATCTATCCAGATTCTGGAAAAGCTATATGATACTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCTTCCATCCAACTTTCCTTGGATGATGGTACTGCTGTGGAAAGTATAAGTCGAATAGATGATATCTTCTCACGTTACTATGGACTTCATGCAGACTTGGTCTTCCCTTATCTTCAATACCTTAGGAGAGAAGTTGAGAAATTTTCAATGAAGGCTCTCCAATAA 2364 0.3981 MEILKAAIPENLKRAIADSDVDDLGSTCSSLHRFFLHFHPFHQMITELADPKYALSGKNKDAALKSKQLGNQCFSNADYAKALDCYTQALREAPLDTGDMESNLVATLYINRATVLHKMSLLVECLRDCTRALQVCPSYAKAWYRRGKANASLGNYKNAICDLNVAKSVEPSMGGRRQIEGELKILLDQCRSTTAVVQIQHKENNCNTVGEMPHIKLQCVSTPDKGRGMVSSCVISPGSLVHVEEPYAMIILKQCRETHCHYCLNDLPADRVPCISCSIPLYCSHQCQTRATGQMFKIYPDYNGFFKNLPSDLGEYAAEVIQCNDSEQEIGDITEHKHECQGVHWPVVLPSEIVLAGRILARFLLNSSPEDIINFVERLELSHCYKQLPSESKLDSHIYAIVLLYCLQHSCGTMFSIDEVSISQVVVIIISQIKVNCMTVVRLKSIDAHGSGHFGDFPFQSGAHSTSNVEQVRVGKAIYKAGSLFNHSCQPNVHAYFLSRALYLRTTNVVAAGSQLELSYGPQVGLWDCKDRLNFLKNEYAFHCLCTGCSEVNRSDLVLNAFHCVNPNCSGAVLESRVLDCEMQKIKHFPIPDHVDKNDDIYEVCHHVFKQNGKSIHIQPGYCLKCGSYCDLESSHAAVGKALACITRLQDAILSQQISSITISDALRSLKLLRLNLHAYNKLTAEAEDSIAQAFCLVGELQLSLDHCKASIQILEKLYDTDDIVIAYELVKLSSIQLSLDDGTAVESISRIDDIFSRYYGLHADLVFPYLQYLRREVEKFSMKALQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01247 787 ProSiteProfiles TPR repeat profile. 140 173 IPR019734 GO:0005515
Gma06g01247 787 Gene3D Tetratricopeptide repeat domain 529 786 IPR011990 GO:0005515
Gma06g01247 787 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 778 - -
Gma06g01247 787 Gene3D SET domain 413 520 IPR046341 -
Gma06g01247 787 SUPERFAMILY TPR-like 59 189 IPR011990 GO:0005515
Gma06g01247 787 SMART tpr_5 140 173 IPR019734 GO:0005515
Gma06g01247 787 SMART tpr_5 63 96 IPR019734 GO:0005515
Gma06g01247 787 SMART tpr_5 685 718 IPR019734 GO:0005515
Gma06g01247 787 SMART tpr_5 106 139 IPR019734 GO:0005515
Gma06g01247 787 Pfam SET domain 226 521 IPR001214 GO:0005515
Gma06g01247 787 SUPERFAMILY SET domain 218 546 IPR046341 -
Gma06g01247 787 Gene3D Tetratricopeptide repeat domain 39 195 IPR011990 GO:0005515
Gma06g01247 787 ProSiteProfiles SET domain profile. 215 521 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01247 Gma-Chr6 11696975 11709350 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma06g01247 SET 2.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01247 K24634 - gmx:100783548 1549.26