Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01232 ATGGGTTCGGTGGACTGTTATCCTTCTCGTACGGACGATGCTGCCGTGGTGTCTTTGGATTCGCTGCCTTTAGGGTTCCGATTCCGACCCACCGACGAGGAACTCGTCAATTACTACCTGCGACAGAAGATCAATGGTAATGGTCGCCAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAATGGGAGCCTTGGGATATGCCCGGTTTGTCGGTGGTACAGACCAAGGATCCGGAATGGTTCTTTTTCTGTCCACAGGACCGGAAGTATCCAAATGGGCATCGATTGAACAGAGCGACAAATAATGGGTATTGGAAGGCAACGGGGAAGGATCGTAGAATCAAGTCTGGGAAGGATTTAATTGGAATGAAGAAGACTTTGGTGTTCTACACTGGTCGTGCACCCAAAGGGAATAGGACCAATTGGGTTATGCACGAGTATCGTCCCACTTTGAAGGAGCTTGATGGTACTAATCCTGGACAGAATCCATATGTCCTTTGTCGTTTGTTTAAGAAACATGATGAGAGCCTTGAAGTTTCACACTGTGATGAAGCAGAGCAGACTGCTTCCACTCCTGTGGCTTACTCCACAGAGGAAATACAATCTGATCTGGCTGTTGTTGCAGGATCCCCCTCACAAGTTACCGAAGATGATAAGCACCAGGCAATGATCCCTGCACACTCTGAGGAAGCAATATCCAATGTTGTAACCCCGGTTGTTTGCCGTAGTGACAGATATGATGCTTGTCATGCACCAAATCAAATTGTATTACCAACTGCGGAGGAGTTTCAACCATTGAACTATTATGACCCAAGAAACGAGCTATTGGATGATAAATTATTCTCCCCTGTACTTGCACATATTCAACCAGAATTTCATTATCAAGCAAACATCGAATCAGATGATTGGTATGGGCTTCAATATGGTACAAATGAGACAAACATGTCAGACTTTTTGAATTCAGTTGTGAATTGGGATCAAGTATCCTTTGAGGATCTCAATTGTCAACAGCAGAGCTACCCCTTGTTTAATGTTAAGGATAGCGTATTAAGCAGCGATCTAGATTCTGAACTTGCCATTATGACATGTATGCATGCTGGTTCTGCGGAGGGGCCAAATAACGGAAGGAAACCTTTGGTGATAACTTCAGAATTTCGCAGCACCACTGGCATCCCTGTTGACTGTGGTGGTGACGAGCAAAAAAGCAATGTTGGGTTATTTCAAAACAATTCCCAGAGAGCTTTTACTGATGTTAATATAGGCCAAGTATATAATGTAGTCGATGATTATGAGCAACGAGGAATCTACAGTGCAGTTGCTAGTGGCAATACTGGAATCATTAGGAGGCATCGTGAGGTACAAAATGAACAGCTAAGCTCAAATTCAACCCAAGGTACTGCACAGAGAAGAATTCGTTTGTCAATGGCTACACATGGCTCAAATAAGATGGTGAAAAGTGGAAGTTGTGCACAAGAAGAGCTTAATTTAAAATCCGTCATTGCTATGGAGGAGAAAGCTTCAGAAAGCCATATTTCTGATGAAAGTTCTACTCTTACTAATGACGGGAATGAACTGCCGAAGACATCCAAATCATCCGGCAAAAGAAAGATTTCTCGACAAGCTACAAAAGCAGGCTCAACCTTGGGGTTGAAAGACTTTTTATTGCTCAGAAGGGTGCCTTACATTTCGAAGGCTTCCTCAAATCGTGCCAAGTGCTCTTCTGTTTTTGTAGTTTCTGCCTTTGTAATGGTCACCTTAGTGGTCTTTACTGACATCTGGGGATATCTTAAATTTTAA 1797 0.4335 MGSVDCYPSRTDDAAVVSLDSLPLGFRFRPTDEELVNYYLRQKINGNGRQVWVIREIDVCKWEPWDMPGLSVVQTKDPEWFFFCPQDRKYPNGHRLNRATNNGYWKATGKDRRIKSGKDLIGMKKTLVFYTGRAPKGNRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLEVSHCDEAEQTASTPVAYSTEEIQSDLAVVAGSPSQVTEDDKHQAMIPAHSEEAISNVVTPVVCRSDRYDACHAPNQIVLPTAEEFQPLNYYDPRNELLDDKLFSPVLAHIQPEFHYQANIESDDWYGLQYGTNETNMSDFLNSVVNWDQVSFEDLNCQQQSYPLFNVKDSVLSSDLDSELAIMTCMHAGSAEGPNNGRKPLVITSEFRSTTGIPVDCGGDEQKSNVGLFQNNSQRAFTDVNIGQVYNVVDDYEQRGIYSAVASGNTGIIRRHREVQNEQLSSNSTQGTAQRRIRLSMATHGSNKMVKSGSCAQEELNLKSVIAMEEKASESHISDESSTLTNDGNELPKTSKSSGKRKISRQATKAGSTLGLKDFLLLRRVPYISKASSNRAKCSSVFVVSAFVMVTLVVFTDIWGYLKF 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01232 598 MobiDBLite consensus disorder prediction 507 543 - -
Gma06g01232 598 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 17 460 - -
Gma06g01232 598 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Gma06g01232 598 MobiDBLite consensus disorder prediction 512 527 - -
Gma06g01232 598 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Gma06g01232 598 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Gma06g01232 598 SUPERFAMILY NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Gma06g01232 598 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01232 Gma-Chr6 11579460 11583138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01232 15 212 NAC Transcription Factor Family AT4G35580 71.212 1.70e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma06g01232 NAM 3.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01232 - - gmx:100808469 1197.96