Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01213 ATGATGAGTCCAAACCTTGCAAAACAAGTTGGGGACACAACCTATACCAAGATCTTTGTTGGAGGATTAGCTTGGGAGACTAAGAGAGATACTTTAAAACGCTATTTCGATCAGTTTGGGGAGATCTTAGAGGCCGTCGTCATCACTGACAGAATCACAGGAAGATCAAAAGGATATGGCTTTGTGATCTTCAGGGACCCAAATTCTGCAATAAGAGCTTGTCATAATCCCTATCCTGTGATTGATGGAAGGAGAGCTAACTGTAATCTTGCAGCTCTTGGTGCACAGAAATTTGATCCATCTATAACAACAGGAAGGCAAAAATTCAGTAGCCCTTCATGGAATATGGCACCAATTCCATTGCAAGGAACTTCCACTCATTACAATCAGCACATACCACACTACCCATTTCCGCATCCAGTCTACAGGTATCCTGGTTATCCTCACCCACAAGACTTGTATGAAATGAACTACAATAATGCTTATGGTGGACAGCAGCTTCCACTCTGTTGGTTTCCAGCATATTGCCAACCCTTTTATGGCCTTAGTAGACAGTTTATTCCAACAGCATATGTGAAAAAGGCACAAACCCCTGACGTGTCACCTCAGGAGTTCACGGTTGTTGGCTTCTCAGAACCTATTTCAGCTTCTCCCTCAATTTGCAGCACTGGATTAGACACAGGAACAGTACCAGCTACAGGAGTGCTAGAATCCCACCAAGAACAGAAGTCTTCAACTTAA 741 0.4332 MMSPNLAKQVGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRITGRSKGYGFVIFRDPNSAIRACHNPYPVIDGRRANCNLAALGAQKFDPSITTGRQKFSSPSWNMAPIPLQGTSTHYNQHIPHYPFPHPVYRYPGYPHPQDLYEMNYNNAYGGQQLPLCWFPAYCQPFYGLSRQFIPTAYVKKAQTPDVSPQEFTVVGFSEPISASPSICSTGLDTGTVPATGVLESHQEQKSST 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01213 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 74 IPR000504 GO:0003723
Gma06g01213 246 Gene3D - 2 106 IPR012677 -
Gma06g01213 246 SUPERFAMILY RNA-binding domain, RBD 6 91 IPR035979 GO:0003676
Gma06g01213 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Gma06g01213 246 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIF) FAMILY PROTEIN 1 246 - -
Gma06g01213 246 PANTHER BOULE-RELATED 1 246 IPR037366 GO:0003729
Gma06g01213 246 SMART rrm1_1 17 89 IPR000504 GO:0003723
Gma06g01213 246 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01213 Gma-Chr6 11403335 11404881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01213 1 147 C2H2 Transcription Factor Family AT2G19380 30.539 1.66e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01213 - - gmx:100799072 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02197 04 52411657 52413420 Gma06g01213 06 11403335 11404881 GST