Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01208 ATGGGTGAATTATTTGGCGTTGGAAAAagaaggaacatcagcagcagcaacaacaacaacaacagttctagtagtagcGTTCTTGGGTTGGATGTGAAGGTGCAACAGAGCCCTGAAGCATTATTCCATAATAGGATGATGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATAATGGTGATGGCGATGGTCCCACGACTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGTGCTTCTTCTGTTCTTGGTCCTGCTATTGATGCTGGCTGTGGTGCTGCTCCTCCTGCACCTGTAAGAACTTTGCAGCCTTTTGACATTTCTTCTTATACTTCTTCTCCCACCACCACTACCACAACCTTCAACTTCAAACCCCCTTCAGCAGGTGTGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGcacaatggagggagcttgaaagacaagctatgatatacaagtacatgatggcttctgttcctgttccacatgatctcctcacacccTCTTCTCGCTCTTCCTGCAGTATGACCCTTTGCTTTCTTTCTCtggatggtggtttcaatctgaggttggcaaatagcactgaccctgagccaggtaggtgtagaagaacagatggtaaaaaatggagatgttcaagagatgtggctcctaaccacaagtactgtgagcgccatatgcatagaggccgtccccgttcaagaaagcctgtggaagttaacaccaacagcaccaccactcccactagcgtcaacaataacaACCATCAAATCAAAAAGGCTCGCCATGAGTGTAATAATAATCCTTTTGCTACACCTGACGTTACTGCGGCTATTTCCAACCCCACATCCAGAAAAAATGGATCTTCTCCCCATTTTCTTGGGTCTACTACCACTCAGCCATACCTTGATTCTTCCCTCTCCCTTGATAACTTTGGTCTAAAAGCTGCTAGTTTTGACTCCGTGGCTTCTGTTTCTGCTAATAAGGAACCCAGGGGTTTAGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCACAATGGCAGTCTCTGATGCACAATAAAGATGGAATGACCAGTGTTAGTTCCTGTAACACCACCGAGTCTCAGTATCTGAATTCATTAGCACTATATAACTCTGGACTAGAACAACAGAATAGACGCCATCCTTTGTTCCTGAACCCTCTTGTTGTTCCCATGGAAAATCTCCAACCGGAGAAACCAAGGGGTTTTATTGATGCTTGGTCTAACGCTGAAAGCAATGCCAACACCAACACCACCAACAAGAACTCTGCTGCATCAATTGGTAAATTATCCCTTTCTTCTCTTGATCTATCAATGGGGGGTGCTGCTGTGAATGAAGATGTGGGTAATGTTAACATGGGTTTGGGCCTAATGGAGCCTAATGGAAAAACGCACACTGGTACTAAAATTTCTCTCTCCAATTGGCAAAACCCAGCACCTTGGGTGGCTTCATCACTTGGGGGTCCACTAGCTGAAGTTCTAAGGTCAAGCACAGTCACTGCCACCACCACCACCAATGAAGCAACCTCCAACACACCCTCGCCAGCCACCACTACACATGCTGAATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCTGATAGCAGTAACAATAGCAGCCCAAGGGTTGCATCATCAAGGGCCAATTCTGAGATGGCCTTGCTAAGGTTTCAATCAAATTAA 1761 0.3623 MGELFGVGKRRNISSSNNNNNSSSSSVLGLDVKVQQSPEALFHNRMMMMAHHNHHHRPLSSPFDNNGDGDGPTTYMSFTNHINLVSGASSVLGPAIDAGCGAAPPAPVRTLQPFDISSYTSSPTTTTTTFNFKPPSAGVMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPHDLLTPSSRSSCSMTLCFLSLDGGFNLRLANSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTNSTTTPTSVNNNNHQIKKARHECNNNPFATPDVTAAISNPTSRKNGSSPHFLGSTTTQPYLDSSLSLDNFGLKAASFDSVASVSANKEPRGLEWMLNGDPISLGASDSQWQSLMHNKDGMTSVSSCNTTESQYLNSLALYNSGLEQQNRRHPLFLNPLVVPMENLQPEKPRGFIDAWSNAESNANTNTTNKNSAASIGKLSLSSLDLSMGGAAVNEDVGNVNMGLGLMEPNGKTHTGTKISLSNWQNPAPWVASSLGGPLAEVLRSSTVTATTTTNEATSNTPSPATTTHAESPSGVLQKTLVSLSDSSNNSSPRVASSRANSEMALLRFQSN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01208 586 PANTHER GROWTH-REGULATING FACTOR 7 96 575 - -
Gma06g01208 586 SMART QLQ_2 146 182 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma06g01208 586 ProSiteProfiles WRC domain profile. 207 251 IPR014977 -
Gma06g01208 586 PANTHER - 96 575 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma06g01208 586 MobiDBLite consensus disorder prediction 248 265 - -
Gma06g01208 586 Pfam QLQ 147 178 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma06g01208 586 Pfam WRC 208 250 IPR014977 -
Gma06g01208 586 MobiDBLite consensus disorder prediction 239 265 - -
Gma06g01208 586 MobiDBLite consensus disorder prediction 524 550 - -
Gma06g01208 586 MobiDBLite consensus disorder prediction 289 308 - -
Gma06g01208 586 MobiDBLite consensus disorder prediction 10 29 - -
Gma06g01208 586 ProSiteProfiles QLQ domain profile. 147 182 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma06g01208 586 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01208 Gma-Chr6 11372813 11375421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01208 419 562 GRF Transcription Factor Family AT5G53660 36.943 4.34e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gma06g01208 WRC 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01208 - - gmx:100796948 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02207 04 52464526 52467207 Gma06g01208 06 11372813 11375421 GST