Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01167 ATGGGCTTTGTCTTTGTCTCTGACCGCGATTTTCCCAATCTTGACAACGTTCCTCATACCTTCACCTCATCTTTTTCCTTTGCTCAACTAAACCACACTCACAAAATAATGGAGGTTTCACCATTGGAGGGTTTCTCCGAACTTGATTGGTGGACACCGCAGTTGCCATATTCAAGCAACCACCTTTGCTTCAATGAGTTCCCGGATTTGGAAAATCTGGACCTCGATTTCAGCCTCCCATCCCTTGGTGAACATTTGGAGGAGGTGGACCAAAAGCCCTCGAACATTGTTGTTCCCGAAGGGCTTCGTTGCAATCATGAAAAGGTTTTTGGGGATGCTTTATTGGCCACTGAACATGTTTCTGCCACTTGTGTGAAGAAAGAGCAAGTGCTGAATAATATTGATCAGAGTCCATTGCCAGTGCTTCTAGCTAGTAACAGCACTACGAGGAAGAAGCCTTGTGCTTTGGAATTTGAGGAAGCTTCATTCGCGATTCAAAATCAAAATGGGTCAGCCACTGCGAGTTATTTGAAGAAAGAGGAGGTGCAGAACATTATTCATCAGAGGCCATTGCCAGTGTCCAGTAGCAGCAAGAAGAGGACGTGTGTGTTAGAGTTTGATGAGATAAAGAAGCATTTTGGGGTTCCCATAACTGAAGCAGCGAAGAGATTGAATGTGGGACTAACCATGTTGAAAAGAAGGTGCAGGGAGCTCAGCATCACGAGGTGGCCACATAGGAAACTCAAGAGCTTGCAATTACTCATCGACAATGTTAAAGAAATGGGTTTGGAAGACGAGGTTCCAAGGTTGGAGCGACAAAAAAGGTTGTTGGAAAAATTACCAGGACTGGAACTAAGTGAAGAAGCCAAGAAGCTGAGGCAAGCTTGCTTTAAAGCTAATTACAAGAAGAGAAGGTGTATGGCACTCCAATCTTGA 936 0.4455 MGFVFVSDRDFPNLDNVPHTFTSSFSFAQLNHTHKIMEVSPLEGFSELDWWTPQLPYSSNHLCFNEFPDLENLDLDFSLPSLGEHLEEVDQKPSNIVVPEGLRCNHEKVFGDALLATEHVSATCVKKEQVLNNIDQSPLPVLLASNSTTRKKPCALEFEEASFAIQNQNGSATASYLKKEEVQNIIHQRPLPVSSSSKKRTCVLEFDEIKKHFGVPITEAAKRLNVGLTMLKRRCRELSITRWPHRKLKSLQLLIDNVKEMGLEDEVPRLERQKRLLEKLPGLELSEEAKKLRQACFKANYKKRRCMALQS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01167 311 Coils Coil 260 280 - -
Gma06g01167 311 Pfam RWP-RK domain 204 251 IPR003035 -
Gma06g01167 311 ProSiteProfiles RWP-RK domain profile. 191 273 IPR003035 -
Gma06g01167 311 PANTHER PROTEIN RKD1-RELATED 125 310 - -
Gma06g01167 311 PANTHER PROTEIN RKD4 125 310 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01167 Gma-Chr6 10980861 10982370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01167 204 308 AtRKD Transcription Factor Family AT5G53040 61.905 1.64e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma06g01167 RWP-RK 2.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01167 - - gmx:102667519 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02244 04 52852464 52854060 Gma06g01167 06 10980861 10982370 GST