Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01160 ATGGGGAAGAAAGGAGGGAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCTTCTTCTAAGGACTCGCCGGTGCCGGAGAAGAAGAAAGAGAACAAGGAAGAGCAGTGGCAGCAGCATGTGGCGCCAGAGGAGGTTTCTGTGGAGCATTTTCCTGCAGAGAGTTCTCCAGATGTTATCAATGAAGGAAGTGCCACGTCGTCAACACCAGTGACTGAAGATAGAAACCATGCCGTTGCCTTTGCAGCAGCAACTGCCGCTGCCGCCGAGGCGGCGGTGGCAGCTGCTCAAGCAGCTGCTAGAGTTGTAAGATTGGCGGGTTATGGACGCCAGCCGAAGGAAGAAAGAGCTGCAATACTCATTCAATCATACTACAGAGGCTACCTTGCTCGACGTGCATTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTAGTGAGGGGACATAATGTGCGAAAGCAAGCTCAGATGACAATGCGATGCATGCATGCATTGGTTCGAGTGCAGGCAAGAGTAAGAGCTCGCAGACTGGAGTTGACTGAGGAGAAGCTTCAGAGAAGAGTTGAGGAACAACATGAATGTCCTAAGCAGTTTTTGAGCCCCATCAAAATGTTAGATATGGATGCTTCCCAGCACATTAAGGAAAACCATTATTTCAGGAAACATGAAGCTGTAATGAAAAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCGGCAGCTGAAGCAATACATGCACATAGACCCAAATGGTGATGATATAGGATGCTACAACACTGAGCGTGAAAGACCACAATTGGATTGGAACTGGTTGGAACGTTGGATGTCATCACAACAATCACCCAACTTAAGACCACGTGAGACCCTTTATAGGACTCTTGCTAATGCTACCACTGATGACATGTCTGAAGAAAAGACAGTTGAAATGGACATGGCTGCTAACATGGGCTTCATGAACCAAGAATCTTATGACACAAGCCCAATTTCTAATAGGTACCACCAGCGCCAGCATAGTGCAGGTATACCTAGCTACATGGCCCCAACCCTGTCTGCAAAGGCCAAGGTTAGGAGTCAAGGGCCTCAAGGCCCGTTTAAGCAACGTGGTTCACCTGGGCCTCACTGGAACTCATCCACCAGGAGAAGTTCTGCTATTGGGCTAGGCTGTGACTCATCTAGCTCCGGTGGGCCCACTTCAGCCCATGTCTCCCCGAGAAGCCCAAACCCAAAAATTAATGAGATTCGTCTCCAATCTAGACGGATTTCAGGTGGCAGCCCAGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAGCCACCAatggctggccttga 1341 0.4907 MGKKGGSWFSSVKKVFKSSSKDSPVPEKKKENKEEQWQQHVAPEEVSVEHFPAESSPDVINEGSATSSTPVTEDRNHAVAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQPKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLELTEEKLQRRVEEQHECPKQFLSPIKMLDMDASQHIKENHYFRKHEAVMKRERALAYAFNCQRQLKQYMHIDPNGDDIGCYNTERERPQLDWNWLERWMSSQQSPNLRPRETLYRTLANATTDDMSEEKTVEMDMAANMGFMNQESYDTSPISNRYHQRQHSAGIPSYMAPTLSAKAKVRSQGPQGPFKQRGSPGPHWNSSTRRSSAIGLGCDSSSSGGPTSAHVSPRSPNPKINEIRLQSRRISGGSPDNVHIEDWALPLGATNGWP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01160 446 Gene3D - 112 165 - -
Gma06g01160 446 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Gma06g01160 446 SMART iq_5 136 157 IPR000048 GO:0005515
Gma06g01160 446 SMART iq_5 113 135 IPR000048 GO:0005515
Gma06g01160 446 PANTHER IQ-DOMAIN 5-RELATED 1 418 - -
Gma06g01160 446 MobiDBLite consensus disorder prediction 352 431 - -
Gma06g01160 446 MobiDBLite consensus disorder prediction 372 425 - -
Gma06g01160 446 MobiDBLite consensus disorder prediction 15 71 - -
Gma06g01160 446 Coils Coil 168 188 - -
Gma06g01160 446 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Gma06g01160 446 PANTHER IQ-DOMAIN 21 1 418 - -
Gma06g01160 446 Pfam IQ calmodulin-binding motif 115 135 IPR000048 GO:0005515
Gma06g01160 446 Pfam IQ calmodulin-binding motif 141 156 IPR000048 GO:0005515
Gma06g01160 446 MobiDBLite consensus disorder prediction 20 40 - -
Gma06g01160 446 Pfam Protein of unknown function (DUF4005) 323 371 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01160 Gma-Chr6 10919656 10924598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01160 1 416 IQD Protein Family AT3G49260 49.451 3.51e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01160 - - gmx:100814022 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02249 04 52897036 52901709 Gma06g01160 06 10919656 10924598 GST