Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01148 ATGTATGCAGAGACTGGTCTTTTCTTCCCATATTTGCACAACGTCTCTCACGGCCTTCATCAGCTTGAGGAGTACTGCAAAACCCAGAAGTCCAATGCTTCAATGGATGACCTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCTGAGGGAGATCTGTTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGACATGTCAGCGGCCATCTCAATGATGTCTTGTGGGGAAGATGTCTCGTCACAGGGACTAAAGTCCACTGATATTGATATTCTTCAAAATGATCAGTTTCTGAGTGAGGTGTTCTATGAATGTGAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCATTCTCTGAGATTCTGGAAATCAAGGTTCCTTTTCTGAACATTGATGAGAACACAATTCAAGAAAACAAGCCATTTACTGACATGCAATTAGCAAAGAGTGTCAGCTCAGGAAGTTTGAGCTCAATGGACTGGATGCGTGGAGCTGCAATGAAGCCTGCTTTCATTGATATCTCTGCAATAGATTTCAATGCAGATTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATCGTCCAATCACCCCTTGAGAGGCCCCTTCTTATCAGCAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCACTTGCTGACAGTCAGCCAAGAATCCGTGGAAGATTTGCAAGGACTGAAGAATCTGATGTCAAGAGGGAATGA 837 0.4313 MYAETGLFFPYLHNVSHGLHQLEEYCKTQKSNASMDDLVQSSAMSEYDLAAEGDLFKAPEPIIEEPIMDMSAAISMMSCGEDVSSQGLKSTDIDILQNDQFLSEVFYECEKDLLEKAAIESPFSEILEIKVPFLNIDENTIQENKPFTDMQLAKSVSSGSLSSMDWMRGAAMKPAFIDISAIDFNADYGMRRSFSEGDIKTLGNGNMNIVQSPLERPLLISNCTSEERFQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDVKRE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01148 278 PANTHER CCT MOTIF FAMILY PROTEIN 27 276 - -
Gma06g01148 278 Pfam CCT motif 228 270 IPR010402 GO:0005515
Gma06g01148 278 ProSiteProfiles CCT domain profile. 228 270 IPR010402 GO:0005515
Gma06g01148 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 27 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01148 Gma-Chr6 10802343 10807429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01148 224 274 C2C2-CO-like Transcription Factor Family AT5G57660 47.059 7.88e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma06g01148 CCT 4.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01148 - - gmx:100820570 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02259 04 53030000 53035207 Gma06g01148 06 10802343 10807429 GST