Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01123 ATGGACCACATGGGAGACCCGAAGAGCATCATACATGAGCTGCTACAAGGTTTAGAGTTGGCAAGGCAACTCCAAGTGCATCTCCACATGCCATCTTCGTCCCAAGAAACACGTGACCTATTGATCCAGAAGATCATATCAACATTCGAAAAGGTGCTTGAAATGGTAAAATGGAAAGGGCCAGTGCCAGCGGGTGAGTCATCACAACATCCCCTAGGGGCTGCATTAATCCGAATGTCAGATTCACCTTTGAGCAGTGAAGACTCCGATAGAGATTTGAAGGACCAGGACCCCAATGCTTTCAAAAAGAGAAACACTTTGCCAAGATGGACGAAACAGATTCGAGTTACACCAGGAATGGGAGTGGAAGGACCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGATATCCTTGGAGCCTTGTACCCGAGGGGCTATTACAGATGTACCCACAGAAATGTTCAAGGCTGTATGGCAACAAAGCAAGTGCAAAGATCCGATGAAGACCCCACCATTTTCGAAATCACTTACCGAGGAAAACACACCTGCACAGTGGCCAACAACGTGGGTTCTTCATCACCAATTCCACTAGAAAACCAGGAACCAAGTTTGAACAACACAAATATTCCTCAGCATCAGCATCAGCAGAATATCCTGCAAAGCCATGAACAACAACAAAACGAACTACTTCTGAGCCTGCGGAAAGGGTTGAGAGTCCAAACAGAAAACCTAGATTCCCCCGAACAACCATTAGTTCCATTCCGTTTCCCTTTGTCCACAAACATAAAAAACGAAAGCCATGTTTTTCCTTCCCCTGTGCTTGAAAACTTCACTTCTCCTTCTTATGTTTCCCCTGCTGCATCAGGAATAGGCCACTTTTCTGTGTCTCCAAGTGGAGTAGTGAACAGCTTTGAAGGGAACCCAAATTTGGCAAATTCTGAGTCTCAGATCAATGATATGATCCCTGCCACTACTACAACTTCAGCAGCTCCAAACTCATCAACCGTTGGCTTAGAGTTTCCCTTTGACCAGTTTGAATTTGATGGCCAGAACTTCACATTCGATAACCCACGGTTTTTCTCTTGA 1095 0.4502 MDHMGDPKSIIHELLQGLELARQLQVHLHMPSSSQETRDLLIQKIISTFEKVLEMVKWKGPVPAGESSQHPLGAALIRMSDSPLSSEDSDRDLKDQDPNAFKKRNTLPRWTKQIRVTPGMGVEGPLDDGYSWRKYGQKDILGALYPRGYYRCTHRNVQGCMATKQVQRSDEDPTIFEITYRGKHTCTVANNVGSSSPIPLENQEPSLNNTNIPQHQHQQNILQSHEQQQNELLLSLRKGLRVQTENLDSPEQPLVPFRFPLSTNIKNESHVFPSPVLENFTSPSYVSPAASGIGHFSVSPSGVVNSFEGNPNLANSESQINDMIPATTTTSAAPNSSTVGLEFPFDQFEFDGQNFTFDNPRFFS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01123 364 MobiDBLite consensus disorder prediction 80 101 - -
Gma06g01123 364 MobiDBLite consensus disorder prediction 84 101 - -
Gma06g01123 364 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 362 - -
Gma06g01123 364 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01123 364 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01123 364 Gene3D WRKY domain 119 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g01123 364 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01123 364 ProSiteProfiles WRKY domain profile. 121 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g01123 364 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 362 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01123 Gma-Chr6 10534865 10537228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01123 8 206 WRKY Transcription Factor Family AT5G24110 44.776 4.44e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g01123 WRKY 6.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01123 - - gmx:100812027 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02278 04 53242762 53244729 Gma06g01123 06 10534865 10537228 GST