Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01119 ATGGAAGACAGTATCCTATGCAAACACACAGTGCATCACACCGTTACCAAGAAACTCATCTCCCCCAAAAAATCATCCCAAACCAATTCGACGACAGAGCGCAGAATAGTGCGGATTTCATACACTGATCCAGACGCAACCGACTCCTCCAGCGACGAGGAAGGTTTCCCCTTCGTTCGCCAAAGAATGAAGCGCTATGTTAACCAGATTGAAATAGAAACCGCCGCCGCCGAAAAAGTTGTTCGGAAAAGGCCCGCCGGTGAGGCTTGCCGCCGGCCGGCGAAGCTTCACTCCGGGAAGAAGTTCCGCGGCGTCCGGCAGCGACCGTGGGGGAAATGGGCGGCGGAGATTCGGGATCCGGCGAGAAGAGTGCGTCTCTGGTTGGGAACCTACGACACCGCCGAAGAAGCTGCTATGGTTTACGACAATGCCGCTATTCGTCTTCGTGGCCCTGACGCGTTAACAAACTTCGTAACGCCGCCGAAAAGAGATTCTCCGTCTCCGTCTCCACCGCCGGCGGCGGCGGAGACTCCGGCGGAGGTTTGCGAGATGAAGGTTGTGGTCACCGAAGAAGCCTCCGGCTCCGGCTACGACTCCAGCGAGGATCATTGCCACCACAACCTCTCCTCTCCGACTTCGGTTCTCCAGTTCCGAAGCAACTCGAGCGAAGAAAATTCCGAGTCTCAGCAGAAAGCAGAACAAGTGTTGAGAGAATGCGAGGGTGAGACAGAAACGAGTTTGTTCGAGGAAACGGGTGAGTTTTTGGCGCTGGATAACATGCCTTTGCCTGCCTGGGATGACGTGTTCAATTTCGAAACGCCAGAGTACCCTCCTCTTCTGTTTCAAGAGGAGGAGAATCTGAATCTACTTCATCAGTCCCAGATGTTGGGCGAAACGGTGCAGTTTTCCTCGGAGGAAGGGTTCAGTGATGAAAGCAGTATCATGCTGGCCGACTCGCTCATAGATTTCGACAGAGCCTGCCCTTCACCATCCTCCTTGTGCCAAGTGGACGATTTCTTCCAAGACATTTTGTTTGCTTCTGATCCTCTCGTTCTGCTCTGA 1062 0.5395 MEDSILCKHTVHHTVTKKLISPKKSSQTNSTTERRIVRISYTDPDATDSSSDEEGFPFVRQRMKRYVNQIEIETAAAEKVVRKRPAGEACRRPAKLHSGKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAAMVYDNAAIRLRGPDALTNFVTPPKRDSPSPSPPPAAAETPAEVCEMKVVVTEEASGSGYDSSEDHCHHNLSSPTSVLQFRSNSSEENSESQQKAEQVLRECEGETETSLFEETGEFLALDNMPLPAWDDVFNFETPEYPPLLFQEEENLNLLHQSQMLGETVQFSSEEGFSDESSIMLADSLIDFDRACPSPSSLCQVDDFFQDILFASDPLVLL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01119 353 MobiDBLite consensus disorder prediction 155 180 - -
Gma06g01119 353 MobiDBLite consensus disorder prediction 206 229 - -
Gma06g01119 353 CDD AP2 100 157 IPR001471 GO:0003700|GO:0006355
Gma06g01119 353 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 6 346 - -
Gma06g01119 353 Pfam AP2 domain 101 150 IPR001471 GO:0003700|GO:0006355
Gma06g01119 353 MobiDBLite consensus disorder prediction 192 233 - -
Gma06g01119 353 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Gma06g01119 353 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Gma06g01119 353 SUPERFAMILY DNA-binding domain 101 158 IPR016177 GO:0003677
Gma06g01119 353 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 346 - -
Gma06g01119 353 SMART rav1_2 101 164 IPR001471 GO:0003700|GO:0006355
Gma06g01119 353 Gene3D AP2/ERF domain 100 159 IPR036955 GO:0003700|GO:0006355
Gma06g01119 353 ProSiteProfiles AP2/ERF domain profile. 101 158 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01119 Gma-Chr6 10477830 10478891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01119 7 275 AP2-EREBP Transcription Factor Family AT4G27950 43.158 2.15e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma06g01119 AP2 9.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01119 - - gmx:100807598 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g02281 04 53289226 53290947 Gma06g01119 06 10477830 10478891 GST