Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma06g01116 | ATGGACAAGAAGCTGCCCCTCTTGTTCATTTTTTCAGCTGCCTTGGTGATGGAAGCAGTGTTGTTGGTTAGTGTTGGAGCTGAACCAGTGGAAGATAAACAAGCTTTGCTTGATTTCCTTGACAACATGAGTCACTCTCCTCATGTCAACTGGGATGAGAACTCTTCTGTTTGCCAAAGCTGGAGAGGAGTGATTTGCAACTCCGACAAGTCCCGAGTCATAGAACTTCGATTGCCTGGAGCTGGGTTGAGTGGTCCAATCCCTCCCAACACTCTGAGTCGCCTCTCGGCACTCGAGGTTGTTAGTCTTAGATCAAATGGTATAAGTGGCCCTTTCCCTCATGGTTTCTCTGAGCTGAAAAACTTGACCAGCCTCTTTCTCCAATCCAACAACATTTCTGGACAATTACCATTGGATTTTTCGGTTTGGAATAACCTTAGTGTTGTCAATTTGTCAAACAATTCCTTCAATGAGAACATCCCCTTTTCAATTTCAAAACTGACTCATCTCACCTCATTAGTCCTTGCCAACAACTCCCTTTCGGGTCAGATTCCTGATCTCGATATTCCAAGCCTGCGGGAGCTGAATTTGGCCAACAATAACCTTAGTGGGGCTGTGCCTAAATCCCTTCTTAGATTTCCTAGTTCGGCCTTTGCCGGTAACAATCTTACATCAGCAGATGCTCTCCCTCCAGCTTTTCCTATGGAGCCACCGGCTGCCTATCCAGCAAAGAAATCGAAAAGACTCGGTGAACCTGCACTGTTGGGTATCATCATTGGTGCTTGTGTGTTGGGATTTGTGGTGATTGCAGGTTTCATGATTTTGTGCTGCTATCAGAATGCTGGTGTAAATGCGCAAGCAGTAAAATCAAAGAAAAAACAAGCCACTCTGAAAACAGAATCTTCTGGAAGTCAAGACAAAAACAACAAAATTGTCTTCTTTGAGGGTTGCAATCTTGCATTTGATCTAGAGGATTTGTTGAGAGCTTCTGCTGAAATTCTTGCAAAGGGTACCTTTGGCATGACATATAAGGCTGCTCTAGAGGATGCAACCACTGTGGCGGTGAAGAGGTTGAAGGAGGTCACAGTTGGAAAACGAGATTTTGAACAGCTGATGGAGGTGGTGGGGAAAATTAAGCACGAAAATGTGGATGCAGTGAGGGCATATTATTATTCAAAGGAGGAGAAACTCATAGTATATGATTACTATCAACAAGGCAGTGTTTGTGCAATGTTACATGGCAAAGGAGGGGAATGCAGAAGTTCTTTAGACTGGGATAGCCGCTTGAGAATTGCAATTGGTGCAGTCAGAGGCATTGCTCACATCCACGCTCAACATGGAGGGAAACTCGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGATATGGATGCATATCTGATATTGGCTTGGCAACATTGATGAGTCCAATACCCATGCCAGCAATGAGAGCAACTGGATACCGTGCACCGGAAGTAACAGACACGCGCAAAGCAACTCATGCATCGGATGTGTACAGCTTTGGGGTGCTGCTACTTGAGCTTCTGACTGGGAAATCCCCCATAAACAGCACAGAAGGTGAGCAGGTTGTCCACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTAGAATTGTTGAGGTATCCAAACATAGAGGAAGAAATGGTGGTGATGCTACAAATAGGGATGGCTTGTGCTGCAAGAATACCGGATCAGAGACCAAAGATGCCTGACTTGGTGAGAATGATAGAGGAGATTCGTCGAGTAAATACGCCAAATCCACCATCCACTGAGTCTAGATCAGAAGTTTCTACACCAACCCCTCGTGCAGTTGACATTCCTTCTACCTCTGTTCAACAATGA | 1902 | 0.4495 | MDKKLPLLFIFSAALVMEAVLLVSVGAEPVEDKQALLDFLDNMSHSPHVNWDENSSVCQSWRGVICNSDKSRVIELRLPGAGLSGPIPPNTLSRLSALEVVSLRSNGISGPFPHGFSELKNLTSLFLQSNNISGQLPLDFSVWNNLSVVNLSNNSFNENIPFSISKLTHLTSLVLANNSLSGQIPDLDIPSLRELNLANNNLSGAVPKSLLRFPSSAFAGNNLTSADALPPAFPMEPPAAYPAKKSKRLGEPALLGIIIGACVLGFVVIAGFMILCCYQNAGVNAQAVKSKKKQATLKTESSGSQDKNNKIVFFEGCNLAFDLEDLLRASAEILAKGTFGMTYKAALEDATTVAVKRLKEVTVGKRDFEQLMEVVGKIKHENVDAVRAYYYSKEEKLIVYDYYQQGSVCAMLHGKGGECRSSLDWDSRLRIAIGAVRGIAHIHAQHGGKLVHGNIKASNIFLNSQGYGCISDIGLATLMSPIPMPAMRATGYRAPEVTDTRKATHASDVYSFGVLLLELLTGKSPINSTEGEQVVHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVVMLQIGMACAARIPDQRPKMPDLVRMIEEIRRVNTPNPPSTESRSEVSTPTPRAVDIPSTSVQQ | 633 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma06g01116 | 633 | MobiDBLite | consensus disorder prediction | 603 | 633 | - | - | |
Gma06g01116 | 633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 404 | 616 | - | - | |
Gma06g01116 | 633 | Pfam | Leucine rich repeat | 87 | 132 | IPR001611 | GO:0005515 | |
Gma06g01116 | 633 | Pfam | Protein tyrosine and serine/threonine kinase | 332 | 593 | IPR001245 | GO:0004672|GO:0006468 | |
Gma06g01116 | 633 | Gene3D | Ribonuclease Inhibitor | 30 | 233 | IPR032675 | - | |
Gma06g01116 | 633 | MobiDBLite | consensus disorder prediction | 601 | 633 | - | - | |
Gma06g01116 | 633 | SUPERFAMILY | Protein kinase-like (PK-like) | 332 | 597 | IPR011009 | - | |
Gma06g01116 | 633 | SUPERFAMILY | L domain-like | 45 | 213 | - | - | |
Gma06g01116 | 633 | ProSiteProfiles | Protein kinase domain profile. | 328 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma06g01116 | 633 | Pfam | Leucine rich repeat N-terminal domain | 31 | 67 | IPR013210 | - | |
Gma06g01116 | 633 | PANTHER | LRR RECEPTOR-LIKE KINASE | 16 | 625 | - | - | |
Gma06g01116 | 633 | Gene3D | Phosphorylase Kinase; domain 1 | 292 | 402 | - | - | |
Gma06g01116 | 633 | PANTHER | OS05G0588300 PROTEIN | 16 | 625 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma06g01116 | Gma-Chr6 | 10443355 | 10445932 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma06g01116 | 21 | 620 | Receptor kinase-like Gene Family | AT4G23740 | 55.288 | 0.0 | 679 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Gma06g01116 | PK_Tyr_Ser-Thr | 1.4e-30 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma06g01116 | - | - | gmx:100809359 | 1226.85 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma04g02284 | 04 | 53318058 | 53321573 | Gma06g01116 | 06 | 10443355 | 10445932 | GST |