Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01093 ATGTCGTCGAGCACAGTTGGTCAAGTCATCAAATGCAAAGCTGCGGTTTCATGGGAGGCAGGGAAGCCACTTGTGATTGAAGAAGTAGAGGTGGCACCACCACAAGCTGGTGAAGTGCGTTTGAAGATCCTCTACACCTCTCTTTGCCACACTGATGTTTACTTCTGGGAAGCCAAGGGCCAAACTCCATTGTTTCCTCGTATATTTGGTCATGAAGCTGGAGGGATTGTGGAGAGCGTAGGTGAGGGTGTGACTCATCTCAAACCAGGGGACCATGCCCTCCCAGTGTTTACCGGGGAGTGTGGAGAATGCCCTCATTGCAAGTCAGAGGAGAGCAACATGTGTGATCTTCTCAGGATCAACACTGATAGGGGTGTCATGATCCATGACAGCCAAACAAGATTTTCTATTAAGGGACAACCTATTTACCATTTTGTTGGTACCTCCACATTCAGTGAATACACTGTTGTTCATGCCGGATGTGTTGCCAAAGTCAACCCTGCTGCCCCACTTGACAAAATTTGTGTTCTCAGTTGTGGAATTTGCACAGGTCTTGGGGCTACTATCAATGTTGCAAAACCAAAACCTGGTTCTTCTGTTGCCATTTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATTATTGGGGTTGATTTAGTTTCTAGCAGATTTGAAGAAGCTAAGAAGTTTGGGGTCAATGAATTTGTGAACCCAAAAGACCATGACAAGCCTGTACAAGAGGTGATTGCTGCAATGACGAATGGGGGTGTGGATCGTGCTGTTGAATGTACTGGCAGCATCCAAGCCATGATCTCGGCATTCGAATGCGTCCACGATGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAACAAAGATGATGCATTCAAAACTCATCCAGTGAATTTCTTGAACGAGAGAACTCTAAAGGGTACCTTCTACGGAAACTACAAACCCCGCACTGATCTTCCTTCTGTTGTGGAGAAGTACATGAATGGGGAATTGGAACTGGAGAAATTCATCACTCACACAGTTCCATTCTCAGAGATTAACAAGGCTTTTGATTACATGCTGAAAGGGGAGTCCATCAGATGCATCATTCGAATGGGGGAGTAA 1146 0.4634 MSSSTVGQVIKCKAAVSWEAGKPLVIEEVEVAPPQAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIHDSQTRFSIKGQPIYHFVGTSTFSEYTVVHAGCVAKVNPAAPLDKICVLSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFEEAKKFGVNEFVNPKDHDKPVQEVIAAMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRTDLPSVVEKYMNGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIRMGE 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01093 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 344 IPR036291 -
Gma06g01093 381 Pfam Zinc-binding dehydrogenase 207 331 IPR013149 -
Gma06g01093 381 Gene3D - 184 322 - -
Gma06g01093 381 SUPERFAMILY GroES-like 329 378 IPR011032 -
Gma06g01093 381 Pfam Alcohol dehydrogenase GroES-like domain 37 164 IPR013154 -
Gma06g01093 381 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 379 - -
Gma06g01093 381 SUPERFAMILY GroES-like 5 187 IPR011032 -
Gma06g01093 381 PANTHER ALCOHOL DEHYDROGENASE 5 379 - -
Gma06g01093 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Gma06g01093 381 CDD alcohol_DH_plants 10 378 - -
Gma06g01093 381 Gene3D - 20 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01093 Gma-Chr6 10283141 10286471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01093 38 371 Monolignol Biosynthesis Gene Families AT1G72680 25.664 3.53e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01093 K18857 - gmx:100801918 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01093 06 10283141 10286471 Gma06g01093 06 10283141 10286471 ECH
Gma04g02062 04 51080493 51084522 Gma06g01093 06 10283141 10286471 GST