Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01084 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCTACATCATATGAAAATGCTAAGCTCTTCTCACTGAAGGGAACTGATGTTAGACCAGGCCTGTCCTCCCAAATTTTTGATCCTGATAAGCATAGGAGCATGTACATGACCGATGCTTACTCCGGCGAGGGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAACTGATAGAACCATCTAGTTCCAGCATCTCTGGAAGTTCAATTCACCCTGATGTAGCCTCTTCTTACCAGCTCAGAGCCAGTTCAGGAGCTTCTATGGTTGCCAATAACCCATCTGATTCTTCTTTCATGTCTACAAGGCATCATGATGCTTACCAGTCAAACTCAGGATCAGATTTGATGGAGAACGGAAGCCTGGATTCACGCGACGATGAAGGTCTAATGAGATTAAGACTAAAAGCACTGGAGAGGGCATTGCTTGATGATAGTGATGCTGGGGAGGATGAAGAGGAGGAGGAGGAGGAAGAGGAAGACATATTTGAGGCTGCACAAAGCATGGAAATTGATCCTGACATTGCTGAGTGGGCTGATTCAATGCATAATATGCTGCTCCATGGTTCACCAAAGGAGTCCTCTTCTTCAGATTCCAATACCAGCAGCATCAGCAGCACCAAAGAAATATCACAAACTTCTCAGACCCCCAAGAAGTTGCTTTATGAATGTGCTATTGCACTTTCTGAAGGAAATGAAGTGGAAGGATCATCTATGATAAACAATCTCCGGCAGATGGTCTCAATTCAGGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTGGCCGAATCCGGAAAAAGTATTTACAAAGCTCTGAGATGCAAGGAGCCTCCAACTTCAGATCGTCTAGCAGCTATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTCATTGCTGCTAACAATGCAATTACAGAAGCAGTGAAAGATGACATGAAGATTCATATAATAGATTTTGACATCAATCAAGGAAGTCAGTACATAAATCTAATCCAAACACTTGCTTCAAGGTCAAGCAAGCCACCACATGTTAGGTTGACTGGAGTTGATGATCCAGAATCTGTGCAGCGATCTGTTGGAGGCCTACGGAACATAGGACAAAGACTAGAAAAACTGGCAGAGGCACTTGGTTTGCCATTTGAGTTTCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCAACTGCAGTCCTGATGAAGCACTAGTGGTAAACTTTGCATTCCAGCTTCATCACATGCCCGATGAGAGTGTTTCGACAGTAAACGAACGGGACCAACTTCTTCGCTTGGTGAAGAGCCTGAATCCAAAGCTTGTGACAGTTGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTACCTAGATTTGTTGAGGCCTACAATTACTACTCTGCTGTGTTTGAGTCACTTGATGCTACTCTTCCTAGAGAAAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTTGTTGCGTGTGAGGGCGAGGATAGGATAGAGCGGTATGAAGTTGCTGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTTCATCCCCAATGAGCACAAATGTCACCGATGAAATCCGAAAACTCATTAAGACGGTGTATTGCGACAGGTACAAGATTAAGGAGGAAATGGGAGCGCTTCACTTTGGTTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTTACCAAGATAA 1803 0.4448 MSLVRSADLAPTSYENAKLFSLKGTDVRPGLSSQIFDPDKHRSMYMTDAYSGEGYEKYFHDSQTEELIEPSSSSISGSSIHPDVASSYQLRASSGASMVANNPSDSSFMSTRHHDAYQSNSGSDLMENGSLDSRDDEGLMRLRLKALERALLDDSDAGEDEEEEEEEEEDIFEAAQSMEIDPDIAEWADSMHNMLLHGSPKESSSSDSNTSSISSTKEISQTSQTPKKLLYECAIALSEGNEVEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPTSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLRNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPDEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRKLIKTVYCDRYKIKEEMGALHFGWEDKNLIVASAWKLPR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01084 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 598 IPR005202 -
Gma06g01084 600 MobiDBLite consensus disorder prediction 195 221 - -
Gma06g01084 600 Pfam GRAS domain family 228 597 IPR005202 -
Gma06g01084 600 ProSiteProfiles GRAS family profile. 217 597 IPR005202 -
Gma06g01084 600 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 598 IPR030011 GO:0003700|GO:0005634
Gma06g01084 600 MobiDBLite consensus disorder prediction 152 172 - -
Gma06g01084 600 MobiDBLite consensus disorder prediction 197 221 - -
Gma06g01084 600 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01084 Gma-Chr6 10174968 10178859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01084 1 597 GRAS Transcription Factor Family AT1G21450 60.732 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma06g01084 GRAS 1.5e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01084 - - gmx:100798897 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01084 06 10174968 10178859 Gma06g01084 06 10174968 10178859 ECH
Gma04g02313 04 53556918 53560609 Gma06g01084 06 10174968 10178859 GST
Gma14g01522 14 36380898 36384813 Gma06g01084 06 10174968 10178859 PCT
Gma06g01084 06 10174968 10178859 Gma14g01522 14 36380898 36384813 PCT