Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01082 ATGTCTCAGGGAAGAGGCAGTGCATCTTTGCCTATTGTGGTCACTGTGGTTTCACTACTGTGCCTTTTGGAACGTGCTAACGCAGCAACTTACTCCGTTGGAGGACCTGGGGGATGGACCTTCAACACTAATGCTTGGCCCAATGGAAAAAGATTCAGAGCTGGTGATATCCTAATCTTCAACTATGACTCAACGACCCACAATGTGGTTGCTGTGGACAGAAGTGGATACAACAGCTGCAAGACACCAGGGGGTGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATCAAACTAGCAAGAGGGCAGAACTACTTCATATGTAACTACCCTGGTCACTGCGAATCTGGGATGAAAGTTGCCATTAATGCGCTGTGA 375 0.4773 MSQGRGSASLPIVVTVVSLLCLLERANAATYSVGGPGGWTFNTNAWPNGKRFRAGDILIFNYDSTTHNVVAVDRSGYNSCKTPGGAKVFSSGKDQIKLARGQNYFICNYPGHCESGMKVAINAL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01082 124 Gene3D - 29 123 IPR008972 -
Gma06g01082 124 PANTHER BASIC BLUE-LIKE PROTEIN 5 122 - -
Gma06g01082 124 ProSiteProfiles Phytocyanin domain profile. 29 124 IPR003245 GO:0009055
Gma06g01082 124 CDD Plantacyanin 29 123 IPR041844 -
Gma06g01082 124 PANTHER BLUE COPPER PROTEIN 5 122 IPR039391 GO:0009055
Gma06g01082 124 Pfam Plastocyanin-like domain 39 117 IPR003245 GO:0009055
Gma06g01082 124 ProSitePatterns Type-1 copper (blue) proteins signature. 101 117 IPR028871 -
Gma06g01082 124 SUPERFAMILY Cupredoxins 29 123 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01082 Gma-Chr6 10147107 10148444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01082 1 124 Phytocyanin Superfamily AT1G17800 43.165 5.14e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01082 - - gmx:100305588 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01082 06 10147107 10148444 Gma06g01082 06 10147107 10148444 ECH
Gma04g02315 04 53593800 53595158 Gma06g01082 06 10147107 10148444 GST