Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01076 ATGAATAAGGATCATAGCCCTCCAGCTTCTGCATCTTACGTGGTGGTTGCATGTGATGCCACTAGGGACCGCACTGAACACGAGATCAAACTCGTTGTTGATCATGTTCGGGCCAGGCGTGTCTTTCTCTCTTCTGGTGACAAGTTGCTTGTGCTATGTGTCTTGCATAAGGTGTCTCACCCTATGGGGTACCAGACATTAGCATGTCCCGAGTCTTTTGCTGGAACCAACTTTCGTGCAATGGAGGATGAAGTCAAGAAGAAAGTTGATGCATATGCAACTGAGCTTTTGTCAAGTTATGAAGATTTTGAAAGTGAAGGGGTCAGTATCGAAGTTAAAGTCACCGCGGGATTTCCAATTAAACATGTTGTTTTACAAGAGGTTACAAACTATAATGCATCTTGGGTAATACTTGACAGACATCTTCGGCGCGACCTGAGGTACCACCTTAACAAGATGCCATGCAAGGTTGCATTGGTTAAAGATGACTTGTCTCTGGATATCTGGAGATCTCATTATGTACATGAGACAAAGATCACTGAAACAAAATGTGTATATTCTTTGTCAAAGTTTGTGTCGCTAGCAGATTGTCATAGTGTTGAAGACATTGAGCATTCTATTATCTCTTGCAAAAGCTATCCCCATTCTATATTTTCTTCTGATGGCTCTAGTACGATTAGGAGCTATACAAAGCAGTCATCATATGGTAACAGGTCACGGGAGAACAGTTCCTTATCAGATTTTGGATCTTCTTCTAAGCAAGAAAGAACAGGACTAAACATCAAAGGAGAATGTAGGCTCATTACTTCTCAGATTGACCAAAAGCAAAACCAAAGTGGCTTTCTGCCAAAACATTCAGATGCACCGCTTCTTTGTACTGGCTGTGGGACAAGAACTGAGTTGTCTATCAAGGAGTCAATGAAGTTCAGCTACTCTGACATACAAAatgcaacaaatgatttttcaaaggataacttattaggtgaaggtggatatggtcacgtatataagggtgtgCTTAAAGATGGACAACAAATTGCAGCAAAGGTAAGGAAACAAGAAAGTTCACAAGGATTTTCAGAATTTCATTCTGAGGTGTACGTCTTAAGTTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGCTATTGTTGCAAAGAAAATAAAAACATCCTGATTTATGAATTTATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATAATGAAGCTGTTCTTGAGTGGCACCAAAGGTATGCCATTGCCGTTGGGACTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGTGGTCCTATTATTCATCGGGACATGCGACCAAGCAATATCCTTCTCACCCATGATTTTGTTCCCATGCTAGGTGACTTTGGTCTTGCCAAATGGAAGACTGGTGATGATACTCTACAAACAAGGATAATGGGAACATTAGGATACCTTGCTCCTGAGTATGCTGAAGACGGAATTGTTTCTGTGGGAACAGATGTGTATTCTTATGGCATTATTCTGCTACAATTGATATCAGGGCGCCAGGTTGGCAATTCCAACAATCCAGAACAACAACAACAACAATCTCTCCGACAATGGGCTGAGCCAATGATAAAGAATTTGGCTTTACATGAACTGATTGATACTCATCTAGGGGAATCATATGACACGCATGAACTCTACCTCATGGCTAAAGCAGCATACTTCTGTGTACAAAGGAAACCTGAGATGCGTCCATCAATGGGAGAGGTAGTTGTGCGACTTCTTGAGGGAGAAAGTAGCCATTTCCACTCCTTGGAAGATCAATTTGTAACTAATTATAATTTATAA 1842 0.3958 MNKDHSPPASASYVVVACDATRDRTEHEIKLVVDHVRARRVFLSSGDKLLVLCVLHKVSHPMGYQTLACPESFAGTNFRAMEDEVKKKVDAYATELLSSYEDFESEGVSIEVKVTAGFPIKHVVLQEVTNYNASWVILDRHLRRDLRYHLNKMPCKVALVKDDLSLDIWRSHYVHETKITETKCVYSLSKFVSLADCHSVEDIEHSIISCKSYPHSIFSSDGSSTIRSYTKQSSYGNRSRENSSLSDFGSSSKQERTGLNIKGECRLITSQIDQKQNQSGFLPKHSDAPLLCTGCGTRTELSIKESMKFSYSDIQNATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKQESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKENKNILIYEFICNKSLHWHLFENNEAVLEWHQRYAIAVGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDDTLQTRIMGTLGYLAPEYAEDGIVSVGTDVYSYGIILLQLISGRQVGNSNNPEQQQQQSLRQWAEPMIKNLALHELIDTHLGESYDTHELYLMAKAAYFCVQRKPEMRPSMGEVVVRLLEGESSHFHSLEDQFVTNYNL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01076 613 Gene3D Phosphorylase Kinase; domain 1 294 396 - -
Gma06g01076 613 Pfam Protein kinase domain 322 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01076 613 Gene3D HUPs 14 162 IPR014729 -
Gma06g01076 613 PANTHER OS01G0253100 PROTEIN 12 605 IPR045271 GO:0004714|GO:0006468
Gma06g01076 613 ProSiteProfiles Protein kinase domain profile. 321 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01076 613 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Gma06g01076 613 SUPERFAMILY Protein kinase-like (PK-like) 305 590 IPR011009 -
Gma06g01076 613 ProSitePatterns Tyrosine protein kinases specific active-site signature. 442 454 IPR008266 GO:0004672|GO:0006468
Gma06g01076 613 CDD STKc_IRAK 327 594 - -
Gma06g01076 613 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Gma06g01076 613 Gene3D Transferase(Phosphotransferase) domain 1 397 605 - -
Gma06g01076 613 MobiDBLite consensus disorder prediction 220 256 - -
Gma06g01076 613 PANTHER RECEPTOR-LIKE KINASE 12 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01076 Gma-Chr6 10076429 10082128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01076 309 592 Trihelix Transcription Factor Family AT5G38560 43.986 4.08e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma06g01076 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01076 - - gmx:100800663 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01076 06 10076429 10082128 Gma06g01076 06 10076429 10082128 ECH
Gma04g02320 04 53659887 53666443 Gma06g01076 06 10076429 10082128 GST