Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01069 ATGGCTGTGTGCTCAATAATGCTGCTGCTGCTACTTTTTACGCTTCTCATTGCAGCAACTAAAACTCAACCCATGTCAAAGCCAAACTGTCCAACAAACTGTGGCTCTGTCACGGTTCCCTTCCCATTTGGCATGACTGAGGATTGTTCCTTGGACGCTTCATTTCTCGTCTCCTGCAACCGAACCTCTTCTTCATCACATGTCCTTTTCTTGCCACAAACCAACATAAGCGTCCTAAACATCTCACTCAATGGCGAACTGCAGATTTCATGGCCAGTAGCCAGCGACTGCTACGCCGAAAGAGGTAAACTCTTGAGTCAAACAATCCAAGACCTAAGTATTACAAGCTTCCAGCTCTCTTCGAACCGAAACATGTTCACCGTACTCGGGTGCGACACGCTTGGACTAGTGGTGGGAACCGATTCGGATGGAAGGAACTACACCACCGGATGTGTGTCCCTGTGCAACAGGCTCCAAGACATCGAAACGAACGGGTCTTGTTCCGGCACCGGTTGTTGCGAGACTTCGATCCCGCGCGGGTTGTCGGGGTTCTCCTACGGTTCTTCGAGCGTGTACAACCACACAAGCGTGATTGACTTCAACCCGTGCGGGCATGCGTTCCTGGTAGAACGTGGGGCCTACAACTTCTCCTCCACGGACCTCTTCAAGTTCGAGAAGACAACGTTTCCCGCTGGGGTGGATTGGGTAGTGAAGAACCAAACGTGCCAAGAAGCTAAGAAAGAGGTTTCAAGTTATGCGTGTAAATCAGAAAACAGTGAATGTTACCATTCATTCGAGGGATCTGGTTATCTTTGTAGCTGCTCAAATGGTTTCGAAGGAAACCCTTACCTACTTGGTGGTTGTCAAGATGTTAATGAATGCATGGGATCCACGGCCGATTGCTTTGATGGGGCAATATGTAATAACCTTCCTGGTGGTTATAATTGTTCATGCCCGGAAGGATTTGAAGGAGATGGGAAAAATGATGGATCAAGATGCAGTCCCAAATCTAGCACCAATTCAAGGAAAGCGATCATCATATTGATAATTGCTTTGAGTGTGAGTGTAAGTCTTGTAACACTACTTGGGGGAAGCTTTTATGTGTATTGGGTATCGAAGAAAAGAAAGATCATCAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCCTTTTCTTACAACAACATATGTCTAGGCATAAAGGATCAATTGAAACGGCCAAAGTCTTCACTATTGAGGAGTTAAAAGATGCCACCAACAACTTTGATGAGGACAAGATCCTAGGTCAAGGAGGCCAAGGAACAGTTTACAAAGGAGTATTGCTAGATAATAGAATTGTGGCAATCAAAAAGTCCAAAATCAGTGATCCAAATCAGATTGAGCAATTCATCAATGAGGTGATTGTGCTTTCCCAAATCAACCATAGGAATGTGGTAAAGCTTTTGGGTTGTTGTTTAGAGACAGAAGTTCCTATGCTTGTTTATGAATTTATTCCCAATGGTACTATTTATGAGCACCTTCATGATTTTAATTGTTCTCTAAAACTTACATGGAAAACAAGACTGAGAATCGCAACAGAAACTGCTGGGGCCTTGGCTTATTTGCATTCTGCTACTTCTACACCAATCATACACAGAGATGTGAAAACTACAAATATATTACTTGATCACAATCTCATTGCAAAGGTTTCTGATTTTGGAGCTTCAAGAATTTTCCCCCTTGATCAAACTCAATTAACCACTCTGGTGCAAGGGACATTAGGGTATCTCGACCCAGAATACTTTCATACAAGTCAATTGACCGAGAAGAGTGATGTTTATAGTTTTGGTGTTGTCCTAGCAGAGCTACTGACAGGAAAGAAGGCACTTTCATTTGATAGGCCAGAGGCTAATAGAAACCTTGCAGCGTACTTTGTTTCTTCAATGAAAACAGGCCAATTACTTGACATTGTGGACAACTACATATCACATGAGGCAAATGTTGAACAACTAACAGAAGTTGCCAATATTGCAAAGCTATGTTTAAAGGTGAAAGGAGAGGATAGACCCACCATGAAAGAAGTTGCAATGGAACTTGAGGGACTTCAAATTGTGGGAAAGCATCGATGGGGAAGTGTTAGTTCATCTTCAGAAGAGACAGAAAACTTGCTACAAAAAGCATCATCTGTTCTCGCTGGTGAAGAAGGCATTAGTGGAAGTGGAATTAATTCTGGTTTTGATAGCTTAAACCGATTTTCAGTGTCTTTGGGTGGTGGAAGATGA 2262 0.4288 MAVCSIMLLLLLFTLLIAATKTQPMSKPNCPTNCGSVTVPFPFGMTEDCSLDASFLVSCNRTSSSSHVLFLPQTNISVLNISLNGELQISWPVASDCYAERGKLLSQTIQDLSITSFQLSSNRNMFTVLGCDTLGLVVGTDSDGRNYTTGCVSLCNRLQDIETNGSCSGTGCCETSIPRGLSGFSYGSSSVYNHTSVIDFNPCGHAFLVERGAYNFSSTDLFKFEKTTFPAGVDWVVKNQTCQEAKKEVSSYACKSENSECYHSFEGSGYLCSCSNGFEGNPYLLGGCQDVNECMGSTADCFDGAICNNLPGGYNCSCPEGFEGDGKNDGSRCSPKSSTNSRKAIIILIIALSVSVSLVTLLGGSFYVYWVSKKRKIIKLKEQFFQQNGGLFLQQHMSRHKGSIETAKVFTIEELKDATNNFDEDKILGQGGQGTVYKGVLLDNRIVAIKKSKISDPNQIEQFINEVIVLSQINHRNVVKLLGCCLETEVPMLVYEFIPNGTIYEHLHDFNCSLKLTWKTRLRIATETAGALAYLHSATSTPIIHRDVKTTNILLDHNLIAKVSDFGASRIFPLDQTQLTTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFDRPEANRNLAAYFVSSMKTGQLLDIVDNYISHEANVEQLTEVANIAKLCLKVKGEDRPTMKEVAMELEGLQIVGKHRWGSVSSSSEETENLLQKASSVLAGEEGISGSGINSGFDSLNRFSVSLGGGR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01069 753 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Gma06g01069 753 Pfam Protein tyrosine and serine/threonine kinase 425 692 IPR001245 GO:0004672|GO:0006468
Gma06g01069 753 Gene3D Phosphorylase Kinase; domain 1 392 497 - -
Gma06g01069 753 Pfam Calcium-binding EGF domain 290 333 IPR001881 GO:0005509
Gma06g01069 753 Gene3D Plasmodium vivax P25 domain 190 341 - -
Gma06g01069 753 SUPERFAMILY EGF/Laminin 288 334 - -
Gma06g01069 753 SMART serkin_6 422 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01069 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Gma06g01069 753 SMART egf_5 293 334 IPR000742 -
Gma06g01069 753 SMART egf_5 241 289 IPR000742 -
Gma06g01069 753 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 730 IPR045274 GO:0007166
Gma06g01069 753 CDD STKc_IRAK 428 695 - -
Gma06g01069 753 SMART egfca_6 290 334 IPR001881 GO:0005509
Gma06g01069 753 ProSitePatterns Calcium-binding EGF-like domain signature. 290 316 IPR018097 GO:0005509
Gma06g01069 753 Pfam Wall-associated receptor kinase galacturonan-binding 30 85 IPR025287 GO:0030247
Gma06g01069 753 Gene3D Transferase(Phosphotransferase) domain 1 498 711 - -
Gma06g01069 753 SUPERFAMILY Protein kinase-like (PK-like) 404 693 IPR011009 -
Gma06g01069 753 ProSiteProfiles EGF-like domain profile. 290 334 IPR000742 -
Gma06g01069 753 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 15 730 - -
Gma06g01069 753 ProSiteProfiles Protein kinase domain profile. 422 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01069 753 CDD EGF_CA 290 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01069 Gma-Chr6 10000986 10004442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01069 1 750 Receptor kinase-like Gene Family AT1G21230 45.669 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gma06g01069 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01069 - - gmx:100798027 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01069 06 10000986 10004442 Gma06g01069 06 10000986 10004442 ECH
Gma14g01475 14 31733270 31736374 Gma06g01069 06 10000986 10004442 PCT
Gma06g01069 06 10000986 10004442 Gma14g01475 14 31733270 31736374 PCT