LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma06g01063	ATGTTGAATTCGTACAAGGTTGATGATTCGGGGCTGCGCCAGCACTACCATTCGGAGTTTCGCTCTCCTCCGATTTGGTTAGGTTCCTTGGGAGGCAGAGACACCAAGGTGGTGGTTGCAGTAGTGAAACTGACGAATGAAAATTCACGACGACCTTATTCAACTTTTGAGGTCATTGCTGGGTACTTGTGGCGGTGTGTGAGTAAAGCACGCTATGAAAAAGGGAAAAGTGACCAACCTACGAGGTTGTCCGCTTTGGTTAATTGTAGGAACCGAATGAGACCACCACTTCCTGATGGGTATGCGGGAAGTGCAGTATTGCCCACAGTGACACCCACATGTTCCTTTGCTGAAATCATGCAAAATCCTTCGAGTTATGCTGTTGGGAACGTTGGAGAGGCAATTGAAAGGGTGACTGGAGAGTTTGTAGAGTCGGCACTTGATCACATAGCAAAGGAGAAAGACATAAATTTGGTGAAGTACAATATTTATTACCCTGCCCCACCTGTGCATAAGGGACATTACAAGGGGAACCCGAACCTTTTTGTTGTTAGTTGGATGAATTTTTCGTTTAAGAATGCAGATTTTGGATGGGGGAAGCCTGTGTATTTTGGCCCTGGCTACATGAATTCTGAAGGGAAAGTAATTGTTATGAACAGGGCTAATGGTTGTGGCCATTGCTTTGGAGGCATCTCACATGGATGGTTTCAAGTACTTTTTTTATGGTGA	729	0.4513	MLNSYKVDDSGLRQHYHSEFRSPPIWLGSLGGRDTKVVVAVVKLTNENSRRPYSTFEVIAGYLWRCVSKARYEKGKSDQPTRLSALVNCRNRMRPPLPDGYAGSAVLPTVTPTCSFAEIMQNPSSYAVGNVGEAIERVTGEFVESALDHIAKEKDINLVKYNIYYPAPPVHKGHYKGNPNLFVVSWMNFSFKNADFGWGKPVYFGPGYMNSEGKVIVMNRANGCGHCFGGISHGWFQVLFLW	242

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma06g01063	242	PANTHER	SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED	1	48	-	-
	Gma06g01063	242	PANTHER	SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED	50	226	-	-
	Gma06g01063	242	Gene3D	-	35	232	IPR023213	-
	Gma06g01063	242	Pfam	Transferase family	47	218	-	-
	Gma06g01063	242	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	1	48	-	-
	Gma06g01063	242	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	50	226	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma06g01063	Gma-Chr6	9954917	9955704	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma06g01063	36	218	Monolignol Biosynthesis Gene Families	AT5G48930	32.240	1.88e-29	112

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma06g01063	K13065		-	gmx:100775549	350.132