Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01059 ATGGTACGGAATCGGAGAAGGATGCCTCCGCGGCGGTGCACGGCGTCTATGGGCAGCAGCAACGGGAGCGAGAGCGATGCGTCAGACTTGGTGATGCGGTGCCTCTCGTGCGAGGAGGAATACGACATGGACGACTCGGGAACCTGCAGGGAGTGCTACCAGGAGGCCAACGAGGCTGAGGAGGAGCTCCGCCGCGAGATCGAAGAGCTCAAATCCAAAGTCTCCTTCCTCACTCTCCCCTATCCCAATCTAAACGCTTCCACCGCCGATATCATCCTCGTtcccgtcgacgactccgacgccgttcccattcccgctcacaagcaccttctgGTTAGTCGCTCTCCTGTTTTCAAAGCAATGCTTGAGAACGATATGGCAGAAAGGCGGAGTGGCACCATCAAGATTTCTGACATATCATATGATACCCTTAGTGCTTTTGTTAATTATTTATACACTGCTGAAGCGTCCCTTGATAACGAATTGGCCTGTAACCTGTTGGTTTTAGGAGAAAAGTATCAGGTGAAGCATCTCAAGACATATTGTGAAAAGTATTTGATCGCCAAAATGAATTGGAATAAAGCTATTTCTAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCGTCCTTGGCAGTGATCTTGGACAACATGGACCTGCTCACTCAAAATGAATGTTATGCGGAGCTGGTGGACACTAATCCTCGTCTTGTTGTGGAAATATATGAAACATATATCGGCAAGCAATTAAATACTGCAGGCGCATTTTAG 783 0.4406 MVRNRRRMPPRRCTASMGSSNGSESDASDLVMRCLSCEEEYDMDDSGTCRECYQEANEAEEELRREIEELKSKVSFLTLPYPNLNASTADIILVPVDDSDAVPIPAHKHLLVSRSPVFKAMLENDMAERRSGTIKISDISYDTLSAFVNYLYTAEASLDNELACNLLVLGEKYQVKHLKTYCEKYLIAKMNWNKAISNYAFAYQYNCKQLRSASLAVILDNMDLLTQNECYAELVDTNPRLVVEIYETYIGKQLNTAGAF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01059 260 PANTHER SPECKLE-TYPE POZ PROTEIN 31 257 - -
Gma06g01059 260 ProSiteProfiles BTB domain profile. 89 160 IPR000210 GO:0005515
Gma06g01059 260 PANTHER GH01369P 31 257 - -
Gma06g01059 260 MobiDBLite consensus disorder prediction 1 26 - -
Gma06g01059 260 Coils Coil 49 73 - -
Gma06g01059 260 Gene3D - 192 259 - -
Gma06g01059 260 Pfam BTB/POZ domain 88 188 IPR000210 GO:0005515
Gma06g01059 260 SMART BTB_4 89 190 IPR000210 GO:0005515
Gma06g01059 260 CDD BACK 195 234 - -
Gma06g01059 260 CDD BTB_POZ_ZBTB_KLHL-like 89 173 - -
Gma06g01059 260 Gene3D Potassium Channel Kv1.1; Chain A 51 191 IPR011333 -
Gma06g01059 260 SUPERFAMILY POZ domain 88 187 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01059 Gma-Chr6 9914315 9917182 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma06g01059 BTB 1.1e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01059 K10523 - gmx:100794118 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01059 06 9914315 9917182 Gma06g01059 06 9914315 9917182 ECH
Gma04g02338 04 53809381 53812147 Gma06g01059 06 9914315 9917182 GST