Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01056 ATGCTGCAAACCCGTCCCGGCGGCTCCGGTGGCCGCACGGTGCTGGTGGGGGTGAAGATGGACTCCCCCAGCAAGGAATTGCTCACATGGGCTTTGGTCAAAGTTGCACACCCTGGTGATACCGTGGTTGCTCTGCATGTTCTTGGGAACAATGAAACCGTGAATGGAGACGGGAAATCGTCGCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTGCTGCTTATAAAGGATTCTGCAATTTGAAACAGGTGGATCTCAAGCTCAAAATTTGCCGTGGTTCGTCAGTGAAGAAAACTTTGGTTCGAGAAGCGAATGGTTATTCCGCAACTCATGTTGTGGTTGGAACTACTCATGGCCTGCATAAAATCCGGTCATCTACCGTTGTAGCTAAGCACTGCGCTAAAAAGTTATCCAAGGATTGTTGTGTTCTTGCTGTCAACAATGGGAAAGTTGTGTTCAAGCGTGACAGCTCGCCGCCGAGTGTTGCAGAGTTACAAGGGGTTGATCGTCATAACAGAAATGGTTTGCTAGGTTCAATACATTGGACACTCGGTAAGAACAGAAAAGTTCTAAGTGATGACAGTTCAGGGATGGATGCCGATGAGAAGAAAACTGGCCCGATTTCGGATCACAGTTTAGCGAAGTTTTTTCTGGAATCTAAAGAAACTGTTAGAAATCCGAGCTGTTCAATTTGTGGCACAACCCTGGCATTGCCAGACCCTTCTTTCTACCAATCTGCAGAAGGAGTTTCTGGTGATGAGGGTAGAGAGAATTCTTTGGCTATGGTGCCTGTGCAACCCACTGTTGCAGCAAAAACGGAATTGAAACCAGGTTGGCCACTACTAGACGGAAGAATTTTATCGGACAGGCAATCTGCTGGTAGATCATTGTTTCACCTGCAGATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCTTCTAGAAACCTTTCATATGCTGTAGATCGTGATGAAAAATCTAAAATTTGTGATCAAGGTCAAGATCAGCCTGCGGCTTTAGATAGTGAAAGTGGCGCTCTTGTTCTGGTAGATGCTGAATTAGGGACTGCTTCTTCGCCTGAAAACAATTCAGGAAACATTCCTAAAGAATTGGAGGGCCTTCATGAGAAATACTCGTCAACTTGCCGATTGTTTGAGTACCAAGAACTTGTATCGGCCACATCGAATTTCTTGCATGAAAACTTGATCGGGAAAGGAGGAAGCAGTCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAACTTGCCGTCAAGATCCTAAATCCTTCTGATGATGTGTTGTCGGAATTTCTTCTGGAAATAGAAATTATCACCACCTTGCATCACAAAAACATTATTTCCCTCCTGGGGTTCTGCTTTGAGAATGGCAAACTTCTTCTCGTTTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGGTAATAAGAAAAATTCACTTGTGTTTGGTTGGTCCGAGAGATATAAGGTAGCAGTAGGTGTTGCTGAGGCTTTAGATTATCTGCATTCTAAAGATGATCAACCTGTGATCCATCGGGATGTGAAGTCATCAAATGTATTATTATCTGAGAATTTTGAACCCCAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCAACCTTGTCATCACATATAACATGCACAGATGTTGCTGGAACCTTTGGTTACTTGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATTGATGTCTATGCATTCGGTGTCGTGCTCCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGCCGTGATTATCCAAAAGGCCAAGAGAGTCTTGTTATGTGGGCAAGTCCGATTCTAAATAGTGGAAAGGTGTTGCAATTGTTAGATCCTAGTTTAGGTGATAATTATGATCATGAGGAGATGGAAAAGATCGTATTGGCAGCCACTCTCTGTATAAAACGTGCTCCAAGGGCTAGGCCTCAAATGAACCTTATCTCAAAGCTCCTTCAAGGTGACGCCGAGGCAATCAAGTGGGCAAGGTTACAAGTTAATGCTTTGGACCCACCAGAAATGCTTGACGATGAAGCGTGTCCACCTAGTAATCTACAGTCACATATAAATCTTGCACTGCTTGATGTGGAGGATGACTTGCTCTCCATGTGCAGTGTTGAGCAGGGTCTCACTTTGGAGGACTACTTGAGAGGCCGGTGGAGCCGTGCATCAAGCTTTGACTGA 2232 0.4485 MLQTRPGGSGGRTVLVGVKMDSPSKELLTWALVKVAHPGDTVVALHVLGNNETVNGDGKSSLLSLVKAFDSVLAAYKGFCNLKQVDLKLKICRGSSVKKTLVREANGYSATHVVVGTTHGLHKIRSSTVVAKHCAKKLSKDCCVLAVNNGKVVFKRDSSPPSVAELQGVDRHNRNGLLGSIHWTLGKNRKVLSDDSSGMDADEKKTGPISDHSLAKFFLESKETVRNPSCSICGTTLALPDPSFYQSAEGVSGDEGRENSLAMVPVQPTVAAKTELKPGWPLLDGRILSDRQSAGRSLFHLQISVVQWAMRLPSRNLSYAVDRDEKSKICDQGQDQPAALDSESGALVLVDAELGTASSPENNSGNIPKELEGLHEKYSSTCRLFEYQELVSATSNFLHENLIGKGGSSQVYRGCLPDGKELAVKILNPSDDVLSEFLLEIEIITTLHHKNIISLLGFCFENGKLLLVYDFLSRGSLEENLHGNKKNSLVFGWSERYKVAVGVAEALDYLHSKDDQPVIHRDVKSSNVLLSENFEPQLSDFGLAKWASTLSSHITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISRDYPKGQESLVMWASPILNSGKVLQLLDPSLGDNYDHEEMEKIVLAATLCIKRAPRARPQMNLISKLLQGDAEAIKWARLQVNALDPPEMLDDEACPPSNLQSHINLALLDVEDDLLSMCSVEQGLTLEDYLRGRWSRASSFD 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01056 743 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
Gma06g01056 743 Gene3D Transferase(Phosphotransferase) domain 1 472 682 - -
Gma06g01056 743 ProSiteProfiles Protein kinase domain profile. 397 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01056 743 CDD USP_Like 13 147 - -
Gma06g01056 743 Pfam Universal stress protein family 12 144 IPR006016 -
Gma06g01056 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Gma06g01056 743 Gene3D Phosphorylase Kinase; domain 1 365 471 - -
Gma06g01056 743 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 139 - -
Gma06g01056 743 SUPERFAMILY Protein kinase-like (PK-like) 378 667 IPR011009 -
Gma06g01056 743 PANTHER OS08G0249100 PROTEIN 5 726 - -
Gma06g01056 743 SMART serkin_6 397 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01056 743 Pfam Protein kinase domain 400 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g01056 743 PANTHER - 5 726 - -
Gma06g01056 743 Gene3D HUPs 11 149 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01056 Gma-Chr6 9893091 9896810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01056 384 664 Trihelix Transcription Factor Family AT1G68690 45.455 1.05e-75 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma06g01056 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01056 - - aprc:113846853 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01056 06 9893091 9896810 Gma06g01056 06 9893091 9896810 ECH