Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01053 ATGGTTGAGATGGGGTCGTGTGGGAGATCTGCTGCCATTGATAATCCCTCAGAAAAGTTTATTATTGAGCAGCAGCAGCATTTGTGCTTAGAGGTTCAAGAGCAGGAGGTTGTTTCTGTTGTGCAGGAGTCTTGTTTAGAGGAAGAGGCTTGCAATGTGGTGGACTCTAATGTTGAGCTCTCCACTGTGATTGATGGTTGTCTGGGAGAGGACCGTGTCTGTTCCAAACGATGTGTTGATGTTACCGAGGGGTCCAGAGAGGGTTTGGGTTTGGGTTTGGTGAGTGAATGCGAAAATGCTGATTTGTTGCCACTGGAGAAATCTGCCGAAGATGATTGCCAGAATTATTTGGGGGTTTCTTGTGGGAGCATTGAAGTTCCCTGTGTAAACAGTGGCTCAGAGGGAAGATTTCTGGATGAGGGTAACTTTGATCTGCCTTCGGggtccttaactgcagatgattcacagatgtattgtgctcaactggatgagcagaaggatgatgagtcgtggtccttaattactgatgattcacagaggcattgtgctcaacaggatgagcagaaggatgatAAGAGCGATGTATTGCCTGCAGCAGGAGATGATTTGGCTGTCGTGGAAGGCAAAAACGATGTCACTGGTGTTCTTGCTGATGCTTTCAGTCATGTACATGATTTCAGGGATTGCGAAGTGTCTTTGGAATCGGAATCCATGGCTGACTTGTTAGTTGATTGCAACTGGCAAAGTGAGCAGGAGGAAATTATGAGAAATACTGATCCCTTGTTGAATGTAGTGGAAAAATGTGACGCTCTAATTGTGGAGGAAACTGATGCTTGCAGGCAGATATCTCCTACACTGGCTATGGAAGTGCCATCAGGGGCACCATCAGGTGCATTATGTACAGATACTGAAGTAGAGAGCACAAGTGATCAGCCATGTGATCAGAAAGATGGTGAGGAAACTGATGTTTGCAGGCAGATATCTCCTACTCTGGCTATGGAAGTGCCATCAGGGGCATTTTGGACAGATACAGAAGTAGAGAGCACAAGTGATCAGCCATGTGATCCGAAAGATGGTGAGGATCAAAATAGTACTTGTGAAGAAATCATCAACATTAATTCATGTGTAAAAATATCATCCTCTCCAGGTTGCAATGAGACTGTTGGGAGCTCACCTGTAGTTGGTTTTCCTTGTGAGCCTGCCCTGTTGGATCCAGAGTATGAAATGAAGAATGGCATGCTGCAAATAGAAGATGATGCCTGTAAATTGAAGGACTGTTCCTCAGAGGAAACTACCAACTCTACCTTTAGAAAACCATTTTCTCCAGAATCAGGTCTGCCCTCTGTTGCTTTAATTACCAACTGCTCTGCAAAGGATGTTCCTGATCAACAGTCTAAGGGTGATGATGTTTCCATTGATAATAATAATGCTGTGAACAATCAAGGGCAGATGGATAATGATGGAACAGAAGCTGTTGAAGTTGATGGTATCACTGAAGGCATACCGTTACCTTCTCAAAGGAATAGTCGAAGAACTAAATTTGGCCGTAAGACACAAACCAAAAAGGCTTCAAGAAAATGCAAGAACAAAACCAAGGTTACACATCCAAATGGGGGTATGAAGCTAAACTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTCTCCAAACCAGCTCGTTCTTCTATCTGGGGATTGATTGGAAATATTGAACAGTTTTTTGAGCAAGATAATGAGCTTGGAGATGGTGAAGCTGTGTGCCAAGAATTGGGGAAGGCTAGAAGCAAGCCTCAAAGTGGGAAAGCGGTTAAGAATGGTGCAAGTACTACCTCATTGGGTTCAGTACAGAAGCATTCTGTTTCAACTACTCGTGTTCGTCTGAAGATCAAATTTGGGAAAGAAGTTGATTTAAGTTGCTCAAATGTCTTGATTCCAGAGTCTGTTGATGGCTTGGCTTCTGCTTCCTATTTGGGGTCTGGTTCAGGTTCTCAGAAAGTAGCTGGCAATGCTGATGATAAAATTTCTGAAGTGGTGGCTTTGGGCCATTCAGAATCTTTCAATAATGACCTGGACAAGGATGGTTTTGTTCTAAATGAACAAGTTGCAAATAACCCCTTAGAAACCACTGAAATAACAGAGAAGTCATATGGGGATGCAGAGGAACCTTGTCTTGCAGTTCCTCCAGAGAAGGTGGTTGAAGCATTGATTGAACCTATCAATAACAAGGGTATGGATCCTGGAACCTCACCTGATTCTGAAGTTATCAATTCAATTCCCGAAGTCCAGGCTGGAGAAAAACATCAAGAAGATGCACATCATGCTGTTTTAGGTTCTTCTAAAGAATTAAATTCTAAATTGGATGTTACCATCAGTAAGAGAGGGAAGAACAAAGAGAAAGTTATTTGTTCAAGTAATTGTATCACTGAAGATGGATCACAAGGTCCACATAAGAATAGTAGAGCTAAGCATTCAAAGAATCACAGACGTAAGAAAAATTGCAGGGATGTGGTCAGCTCTTTGGAATTGCCCACTGATATAAGCAAATCTTTGAGCAGTAAAGAATTGTCCCCAGAATCATTGCCTCTTTCTGTAGAGACTGAACTTGGAGGCTCCACTGAGGCTTTGAAAGTTAAAAATCATACGGACGTTAAGACAAGTGACAAACCATCTGTTGACCATGGATTTTCAGATTCCCTGGTTGCTGAGAATATGCTGTCATCTGCAAGACCTTTGGAGCGTAAACTACCTAAAAGTCTTAGAGCTAGTAAAGTTAGCAAGACCAAATCTAAAGCTTCTGACTCAACTGGCAGGAAAAAGACTACTGCTGGTATACGCAAGGAGAAACAGATAAAGGCAATTAATAAGAGCAAAGTCAAGGGAAAAGGTGTTTCTCTTAAAGTTACATGTGAAGTGGAAGATTGCCTGCATCCAGAAGAAAATGCTGGAAATCATAAGCTGGATGCTGTTGGAAAAATTATTGCTGATGACAACAGAGTATCGGTCAATTTATCTAATTTGGACATGCTGTCTGGTGTTGGTTATGGGGAGCAACTTCTATCACCCCGTAATGCATGGGTTCGTTGTGATGATTGTCACAAGTGGCGGCGAATTCCAGCTGTGCTTGCAGACCGAATTGATGAAACTAACTGCACCTGGACATGTAAGGACAGCAGTGATAAAGCCTTTGCTGATTGTGCTATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCGGAGTTGGGATTATCAGATGCCTCGGGTGAAGAAGATGCATATGAAGGTTCCAAAAATTTTAAGGAATTAGAATATCGGCCTCCGTTAGTTTCCCAGGAGTCAACTTTTACCCATATTTTGACCAATGAATTTCTGCATCGTAGCCATAAAACTCAGACTATTGATGAGATAATGGTCTGTCATTGCAAGCCATCTCAAGAAGGAAAGTTGGGCTGTGGGGATGAATGTCTAAATCGGATTCTTAATATTGAATGTGTGCAAGGAACCTGCCCATGCGGGGACCGTTGTTCCAACCAGCAGTTCCAAAAACACAAGTATGCTAGCCTGAAGTGGTTTAAATGTGGGAAAAAGGGTTATGGACTGAAGGCAATTGAGAATGTAGCTCAAGGCCAGTTTCTTATTGAATACGTTGGAGAGGTACTTGATATGCAAGCATACGAGGCACGGCAAAGAGAGTATGCTTTGAAGGGTCATCGGCATTTCTATTTTATGACCTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGACTGTTTGCATTGAGGGATATTAAGAAGGATGAAGAATTGACCTTCGATTACAACTATGTGAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTAACTGTCGAGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAACTGATAGTTCAAAGTGATTCAGAAGAAGAATTTCCAGAACCTGTCATGCTCACCAAAGATGGTGAAATTGAAGATTCTGTACCTACACCCGAGTATTTTAATAATGTTGATACACAATCTGCTAAACATATGTTGAAAGACAGGGATATATTGGACAATTCTACAACTGCTATAGATTCGGATGGTTCTCTAGAGAAAGAGCGTTCTATGAACCCTGCCTCTGCTGTTTCTCTGTTGCACAGCTCAGCAGAAATGGAGGATTCAAAGGGTAAATTACAATCTTCTGTTCAAGTTGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGCAAACCCATGCCTGCTGTACACCAAGGATATGAAAAGGAATCAGAATTTGCAGACAAAACTTCTTCCATTCAAAGATTAGACACTACTTCTCCCCTTACAACTGTCAGCAAAATGTTACCGAATTCTGCTGGTAGTAACAGGGAGTCAAAGTCTGAAATAATTGGAGGCAGGAAGACTCCTAAGTTAAAAGGTTCTGTTAAAAAGGGAAAGGTTCATGCTAATCCTCCAAATGGCCTTAAAACTGAGGTGACAGCCAATCGATTACAGGTGCCATCAATAAAACACAAAAAAGTAGAAGGTTCTTCCAATGGACGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTGCTGGATGGAGATGGTGGAATAAGCAAAAGAAAAGATGCCACCAAAGGGTACTTGAAGCTTTTGTTTCTCACTGTGGCATCAGGAGATAGAATTAATGGTGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGATGCTCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAAAATGGTTTGCAGATGTTACATAACATTATGAAGCAGTACAGGCATGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTGGAGTTCCTAGAAGCAGGCAAGATTTTGACATATGAACATATTAATGGTGGTCCTCCTTGTCGTGGAATGGAGAGCTTTAGAGAGTCAATGCTTTCTCTGACAGAGCATGAAGACAAACAGGTCCATCAAATTGCTCGAAACTTCCGAGACAGATGGTTTCCCAGACATGCCAGAAAACATGGCTATATGGACAGGGATGATAACAGAGTGGAATCTCACAGAAGTTTCAAGTGTAACAGATTTTCAGCATCACAGAGTTATAGGCATGAACAGGATTTAAAGACTACAGAAGCAAGTGATTGTAGTCAGCAGTCGATGCTTGTGACAACTCCAGTAGATGCTGAAGCCCGGGAAGGCTTTCCTGTGCAGTCTCTAGATGGGGTTGAAACCAAAACAGCTGAAAAGCGTAAGCGCAAAAGCCGATGGGATCAACCAGCCGAAACAAACTCGCATTCTGATGTCGTTATGAGCTCTATTGGTGAAAGCCAGAACATTCATGAGGATGTTCCACCAGGGTTTTCGTGTCCAGTAGGTTCATTAAATGCTTCCCTAAACTCTGGCAATCTTGCCTTGCAAAATGCAAGCCGTTCTGGATGTCCCTCTGATATAATTATTGGTCATCCAAAAGAGAAATTTAACTCTTGCTTGGCTGTCTCATTTGGAATGCCATGGTCTGTTGCCCAGCAATATGGAACTCCTCATGCTGAATTTCCAGAGTGTTGGGTCACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCACTACCCCCGTATCCACGGGACAACAAAGATTGTCAACCTTCTAATACTAATGCTATGATAATTGATCAGCCTGCTGAAGTTGAGCAGGGGGATACCAGCGGTATGGTTAATTGTCGCTCTGATGATATGATTCCCAGCACAACTGGTGTTAACCCTGAAGACTCTAACCTTCTGTTTGAGGACAATAAACACATAAGTAAACGATTGAAGGGTGACTCAAATGATTTGGGAACGAGGTACTTTAGACAGCAGAAAATACACCGACCATGGTTCAAGAGGAATGCATGGAAATGTGATGAGAACAACTCTAGTGGTGATATGTGCAGTATAGATGTAGGAGATGTACCAAAAGAGTCAAAAGTTACTTGTGACGCGGAGGATGCAATCTGTAGAGAGGAGTAA 6123 0.4109 MVEMGSCGRSAAIDNPSEKFIIEQQQHLCLEVQEQEVVSVVQESCLEEEACNVVDSNVELSTVIDGCLGEDRVCSKRCVDVTEGSREGLGLGLVSECENADLLPLEKSAEDDCQNYLGVSCGSIEVPCVNSGSEGRFLDEGNFDLPSGSLTADDSQMYCAQLDEQKDDESWSLITDDSQRHCAQQDEQKDDKSDVLPAAGDDLAVVEGKNDVTGVLADAFSHVHDFRDCEVSLESESMADLLVDCNWQSEQEEIMRNTDPLLNVVEKCDALIVEETDACRQISPTLAMEVPSGAPSGALCTDTEVESTSDQPCDQKDGEETDVCRQISPTLAMEVPSGAFWTDTEVESTSDQPCDPKDGEDQNSTCEEIININSCVKISSSPGCNETVGSSPVVGFPCEPALLDPEYEMKNGMLQIEDDACKLKDCSSEETTNSTFRKPFSPESGLPSVALITNCSAKDVPDQQSKGDDVSIDNNNAVNNQGQMDNDGTEAVEVDGITEGIPLPSQRNSRRTKFGRKTQTKKASRKCKNKTKVTHPNGGMKLNLEAARKKRSCFSKPARSSIWGLIGNIEQFFEQDNELGDGEAVCQELGKARSKPQSGKAVKNGASTTSLGSVQKHSVSTTRVRLKIKFGKEVDLSCSNVLIPESVDGLASASYLGSGSGSQKVAGNADDKISEVVALGHSESFNNDLDKDGFVLNEQVANNPLETTEITEKSYGDAEEPCLAVPPEKVVEALIEPINNKGMDPGTSPDSEVINSIPEVQAGEKHQEDAHHAVLGSSKELNSKLDVTISKRGKNKEKVICSSNCITEDGSQGPHKNSRAKHSKNHRRKKNCRDVVSSLELPTDISKSLSSKELSPESLPLSVETELGGSTEALKVKNHTDVKTSDKPSVDHGFSDSLVAENMLSSARPLERKLPKSLRASKVSKTKSKASDSTGRKKTTAGIRKEKQIKAINKSKVKGKGVSLKVTCEVEDCLHPEENAGNHKLDAVGKIIADDNRVSVNLSNLDMLSGVGYGEQLLSPRNAWVRCDDCHKWRRIPAVLADRIDETNCTWTCKDSSDKAFADCAIPQEKSNAEINAELGLSDASGEEDAYEGSKNFKELEYRPPLVSQESTFTHILTNEFLHRSHKTQTIDEIMVCHCKPSQEGKLGCGDECLNRILNIECVQGTCPCGDRCSNQQFQKHKYASLKWFKCGKKGYGLKAIENVAQGQFLIEYVGEVLDMQAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKKDEELTFDYNYVRVFGAAAKKCYCGSPNCRGYIGGGDPLNAELIVQSDSEEEFPEPVMLTKDGEIEDSVPTPEYFNNVDTQSAKHMLKDRDILDNSTTAIDSDGSLEKERSMNPASAVSLLHSSAEMEDSKGKLQSSVQVEEISQQMEDVTSKPMPAVHQGYEKESEFADKTSSIQRLDTTSPLTTVSKMLPNSAGSNRESKSEIIGGRKTPKLKGSVKKGKVHANPPNGLKTEVTANRLQVPSIKHKKVEGSSNGRFEAVQEKLNELLDGDGGISKRKDATKGYLKLLFLTVASGDRINGEAIQSNRDLSMILDALLKTKSRAVLNDIINKNGLQMLHNIMKQYRHDFKKIPILRKLLKVLEFLEAGKILTYEHINGGPPCRGMESFRESMLSLTEHEDKQVHQIARNFRDRWFPRHARKHGYMDRDDNRVESHRSFKCNRFSASQSYRHEQDLKTTEASDCSQQSMLVTTPVDAEAREGFPVQSLDGVETKTAEKRKRKSRWDQPAETNSHSDVVMSSIGESQNIHEDVPPGFSCPVGSLNASLNSGNLALQNASRSGCPSDIIIGHPKEKFNSCLAVSFGMPWSVAQQYGTPHAEFPECWVTAPGMPFNPFPPLPPYPRDNKDCQPSNTNAMIIDQPAEVEQGDTSGMVNCRSDDMIPSTTGVNPEDSNLLFEDNKHISKRLKGDSNDLGTRYFRQQKIHRPWFKRNAWKCDENNSSGDMCSIDVGDVPKESKVTCDAEDAICREE 2040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01053 2040 MobiDBLite consensus disorder prediction 595 616 - -
Gma06g01053 2040 SMART shorttest3 1132 1183 IPR006560 GO:0005634|GO:0018024
Gma06g01053 2040 Pfam AWS domain 1147 1181 IPR006560 GO:0005634|GO:0018024
Gma06g01053 2040 MobiDBLite consensus disorder prediction 906 943 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 817 831 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 1777 1807 - -
Gma06g01053 2040 ProSiteProfiles AWS domain profile. 1132 1182 IPR006560 GO:0005634|GO:0018024
Gma06g01053 2040 MobiDBLite consensus disorder prediction 600 616 - -
Gma06g01053 2040 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 497 1977 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 876 890 - -
Gma06g01053 2040 ProSiteProfiles Zinc finger CW-type profile. 1018 1072 IPR011124 GO:0008270
Gma06g01053 2040 SMART PostSET_3 1309 1325 IPR003616 -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 806 836 - -
Gma06g01053 2040 Gene3D - 1015 1077 - -
Gma06g01053 2040 SUPERFAMILY SET domain 1112 1322 IPR046341 -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 344 363 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 510 532 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 1782 1799 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 870 894 - -
Gma06g01053 2040 ProSiteProfiles SET domain profile. 1184 1301 IPR001214 GO:0005515
Gma06g01053 2040 CDD SET_SETD2 1183 1325 IPR044437 GO:0010452|GO:0046975
Gma06g01053 2040 MobiDBLite consensus disorder prediction 925 943 - -
Gma06g01053 2040 Gene3D SET domain 1080 1334 IPR046341 -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 500 538 - -
Gma06g01053 2040 ProSiteProfiles Post-SET domain profile. 1309 1325 IPR003616 -
Gma06g01053 2040 SMART set_7 1184 1307 IPR001214 GO:0005515
Gma06g01053 2040 Pfam SET domain 1195 1301 IPR001214 GO:0005515
Gma06g01053 2040 MobiDBLite consensus disorder prediction 1500 1522 - -
Gma06g01053 2040 MobiDBLite consensus disorder prediction 1387 1406 - -
Gma06g01053 2040 PANTHER SET DOMAIN PROTEINS 497 1977 - -
Gma06g01053 2040 Pfam CW-type Zinc Finger 1024 1070 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01053 Gma-Chr6 9862351 9876640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01053 1167 1324 C2H2 Transcription Factor Family AT2G23740 33.702 5.25e-21 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma06g01053 SET 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01053 - - gmx:100795379 4019.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01053 06 9862351 9876640 Gma06g01053 06 9862351 9876640 ECH
Gma04g02344 04 53856234 53870055 Gma06g01053 06 9862351 9876640 GST