Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01039 ATGTCGACCCAGAATCGTCGTTCGTCGTTTTCGTCCTCAACGACGTCGTCCTTGGCCAAACGCCATGTATCCGCCTCAACGACGTCGTCGTCTTTGGCCGCTCCTGCAAACATGGCCAAGAAGCGTCCTCCTCTCTCCAACCTCACCAACACCGTTGCTCACCGCAACTCTTCCTCTTTGGTTCCATGCGCAGCTAAATTTGCCAAGACCAAGAAAGAGGTTGTTCCGGCGTGTTCAGGGAACAAAAGACCAACATTGGCGAATGTTAAACCCACTAGCGCAGCTATTTTTCCGAAGGCTAATTCTTTCCCTGTAAGGGATGAAGCTCCTCCTCCGGTTGCCACCGTTACTGTTCCGGCTCCGGTGGTGGATGTTTCACCTAGTAAATCAGATGCAATGTCGGTTTCTATGGATGAGTCAATGTCTTCTTGTGACTCCTTCAAGAGCCCTGACATTGAATATGTGGACAACATCGATGTTGCAGCCGTTGATTCAATTGAGAGGAAAACATTCAGCAATCTCAACATCTCTGATTCTACAGAAGGGAACATTTGTAGTAGAGACATACTTGTTGAGTTGGAGAAGGGAGAAAATTTTGTCAATGTTGATAATAATTACGCGGATCCTCAGCTCTGTGCAACCTTTGCTTGTGATATCTACAAGCACCTTCGTGCATCTGAGGCCAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGAGATAAACCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTGGAGGTGGCTGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACAGTAAACTACATTGATCGGTATCTTTCAGGGAATGTGATGAACAGACAGAGGTTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATACGAGGAAATTTGTGCGCCTCAGGTGGAGGAATTTTGTTACATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAGATGGAATCTGCTGTCTTGAATTTTCTCAAGTTTGAAATGACAGCCCCAACAGTAAAATGTTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAGTCGATGAGGTCCCTTCCCTACAACTAGAGTGCTTGACAAACTATATTGCCGAATTGTCTCTCATGGAGTACAGTATGCTTGGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTCCTGGCCAAATTCATACTTTTCCCTTCAAAGAAACCATGGACTTCCACATTACAGCATTACACGTTGTACAAGCCTTCTGATCTGTGTGTTTGCGTGAGGGATCTTCACCGTCTTTGTTGTAACAGCCCCAATTCTAATTTGCCTGCAATTAGGGAGAAATACAGTCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCCCCAGAATTTTTCCAGAATTGA 1443 0.4463 MSTQNRRSSFSSSTTSSLAKRHVSASTTSSSLAAPANMAKKRPPLSNLTNTVAHRNSSSLVPCAAKFAKTKKEVVPACSGNKRPTLANVKPTSAAIFPKANSFPVRDEAPPPVATVTVPAPVVDVSPSKSDAMSVSMDESMSSCDSFKSPDIEYVDNIDVAAVDSIERKTFSNLNISDSTEGNICSRDILVELEKGENFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMERIQKEINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQLECLTNYIAELSLMEYSMLGYAPSLIAASAIFLAKFILFPSKKPWTSTLQHYTLYKPSDLCVCVRDLHRLCCNSPNSNLPAIREKYSQHKYKYVAKKYCPPSIPPEFFQN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01039 480 MobiDBLite consensus disorder prediction 1 35 - -
Gma06g01039 480 CDD CYCLIN 248 337 IPR013763 -
Gma06g01039 480 PANTHER CYCLIN-A1-1 30 479 - -
Gma06g01039 480 SUPERFAMILY Cyclin-like 207 344 IPR036915 -
Gma06g01039 480 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
Gma06g01039 480 Pfam Cyclin, N-terminal domain 218 344 IPR006671 -
Gma06g01039 480 PANTHER CYCLINS 30 479 IPR039361 -
Gma06g01039 480 Gene3D - 232 345 - -
Gma06g01039 480 PIRSF Cyclin_A_B_D_E 1 476 IPR039361 -
Gma06g01039 480 SMART Cyclin_C_2 347 470 IPR004367 -
Gma06g01039 480 MobiDBLite consensus disorder prediction 1 51 - -
Gma06g01039 480 CDD CYCLIN 345 438 IPR013763 -
Gma06g01039 480 Pfam Cyclin, C-terminal domain 347 466 IPR004367 -
Gma06g01039 480 SMART cyclin_7 351 439 IPR013763 -
Gma06g01039 480 SMART cyclin_7 254 338 IPR013763 -
Gma06g01039 480 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Gma06g01039 480 Gene3D - 218 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01039 Gma-Chr6 9731596 9734548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01039 4 480 Core Cell Cycle Gene Families AT1G44110 62.733 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01039 K06627 - gmx:100789565 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01039 06 9731596 9734548 Gma06g01039 06 9731596 9734548 ECH
Gma04g02355 04 53970922 53973621 Gma06g01039 06 9731596 9734548 GST
Gma14g01422 14 30219832 30224210 Gma06g01039 06 9731596 9734548 PCT
Gma06g01039 06 9731596 9734548 Gma14g01422 14 30219832 30224210 PCT